Anser cygnoides (swan goose): 106046929
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Entry
106046929 CDS
T04896
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106046929 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acyg03041
]
106046929 (EFTUD2)
Spliceosome [BR:
acyg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
106046929 (EFTUD2)
Complex C
U5 SnRNP specific factors
106046929 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Septin
Motif
Other DBs
NCBI-GeneID:
106046929
NCBI-ProteinID:
XP_066837659
LinkDB
All DBs
Position
22:3556945..3579227
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AA seq
971 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDDEDDELGRESKDLDELEDDDDDDDMGDHDEDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFSLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTIVLPDTKGKSFLFNIIDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLVL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTYGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTTLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKTKIEHTYTGGVDSDLGEAMSECDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATVTEPRGNEAQIFRPLKFNTTSVIKIAVEPVNPSELP
KMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVT
FCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTK
YDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCD
ELIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPAD
CVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSVF
HHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLEL
AKQDVVLNYPM
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggacacggacctgtacgatgagttcgggaactacatcgggccggagctggactcggac
gatgaggacgacgagctgggcagggagtccaaggacctggacgagcttgaggatgatgac
gacgatgatgatatgggggaccacgatgaagaccaccctgggatggaggtggtgctgcac
gaggataagaagtactatcccactgccgaggaggtctatggacctgaagtagagacgata
gtgcaagaggaagacacgcagcctctcactgagcctattattaaacctgtgaaaaccaaa
aagttctctttgatggaacagacgttaccggtcactgtctatgagatggatttcctggca
gatctgatggacaactcggagctaattcgaaatgtgactctgtgtgggcaccttcaccat
ggcaagacttgttttgttgactgcctgatagaacagacgcacccagaaatccggaagcgc
tacgaccaggatctttgctacaccgatatattgttcacagagcaagagaggggagtaggg
atcaagagcacaccagtgactattgttctgccagacaccaaaggaaagtcttttctcttc
aacatcatcgacactccaggtcatgtcaatttttccgatgaggtgacagcgggccttcgt
atctcagatggcgttgtgcttttcattgatgcagctgagggggtgatgctgaacacagag
aggctgatcaagcacgcggtgcaggaaaggctagcagtgactgtgtgcatcaacaaaata
gaccgcctgatcctggagctgaaattgccccctacggatgcctattacaaactccggcat
attgtagatgaagttaacggtctgataagcatgtattccaccgatgagaacctcgttctg
tctccccttctggggaacgtgtgtttctccagttcacagtacagcatctgcttcacactg
ggatcttttgcaaagatttatgcagacacatatggagatatcaattaccaagagttcgcg
aagcgactttggggtgacatctacttcaacccaaagacacggaagttcactaaaaaggcc
ccaactagcagttcccagcgcagttttgtggagttcattcttgagcccctgtacaagatc
ttggctcaggtggtgggggatgtggacacgaccctgcctaggactctggatgaacttggc
atccacctgaccaaagaggaattgaaattgaacattcgaccgctcctgcggcttgtctgc
aagaagttcttcggggaattcacaggctttgtggacatgtgcgtgcagcatattccctcc
ccaaaggtgggagccaagacgaaaatcgagcatacctacactggtggcgttgactctgat
ctaggggaggccatgagtgaatgcgaccctgatggtccgctgatgtgtcacacaacgaaa
atgtacagcacagatgacggtgttcagttccacgcctttggcagagtgctcagtggtacc
atccatgctggacagcctgtgaaggtcctaggagaaaactataccctggaagatgaggag
gattcacagatctgcactgttggacgcctctggatctcagtggcgaggtatcacattgag
gtgaaccgggttcctgctggcaactgggtgctgatagaaggggtggaccagcccatagtg
aagactgcaaccgtcacggagcctcgaggcaatgaggctcagatctttcgtcctttgaag
ttcaacaccacgtctgtcatcaaaatagctgtagagccagtcaacccgtctgagctcccc
aaaatgttagatggtcttcgcaaagtcaacaagagttacccctcgcttactactaaggtg
gaagagtcaggggaacatgtgatcctggggacaggggagctctatctggattgtgtgatg
catgatctacggaagatgtattcggagatcgatatcaaggtcgctgatccagttgtgacg
ttctgcgagacagtggtggaaacgtcctccctgaagtgctttgctgagacacccaataag
aagaacaagatcacgatgattgctgagcctctggagaagggacttgcggaggacattgaa
aatgaagtggtccagataacgtggaacagaaagaaactgggtgaattcttccagaccaaa
tatgactgggatttgctggctgcccgttccatctgggcctttgggccagacgctactggc
ccaaacatcctcgtagatgatacgctaccctcagaggtggacaaggcactgctgggctct
gtgaaggacagcatcgtgcagggatttcagtgggggaccagggaagggcctctctgtgat
gaactgatccgtaatgtgaagtttaagattctggatgcagtgattgctcaggagcccttg
cacagaggcgggggacagatcatcccaacggcacggagagtggtgtattctgctttcctg
atggccacccctcgcctgatggagccctactacttcgtggaggtgcaggcccctgctgac
tgcgtttctgcggtgtacacggtgctggcccggcggagaggccacgtgacacaagatgct
ccgatcccgggttcccctctctacaccatcaaagccttcatcccagccattgattccttt
gggtttgagacagacctgaggacccacacgcagggacaagcgttctcgctgtccgtcttc
caccactggcagattgtgcccggtgaccccttggacaagagcatcgtcatccgacccctg
gagccgcagccagccccacatctggccagagagttcatgattaagaccaggcgcaggaag
ggcttgagcgaggatgtgagcatcagcaagttcttcgatgaccccatgttgctggagctg
gccaagcaagatgttgttctcaactacccgatgtga
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