Anser cygnoides (swan goose): 106048796
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Entry
106048796 CDS
T04896
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg03440
Homologous recombination
acyg03460
Fanconi anemia pathway
acyg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106048796 (BRCA1)
09124 Replication and repair
03440 Homologous recombination
106048796 (BRCA1)
03460 Fanconi anemia pathway
106048796 (BRCA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
acyg01009
]
106048796 (BRCA1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
acyg04121
]
106048796 (BRCA1)
03036 Chromosome and associated proteins [BR:
acyg03036
]
106048796 (BRCA1)
03400 DNA repair and recombination proteins [BR:
acyg03400
]
106048796 (BRCA1)
Enzymes [BR:
acyg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106048796 (BRCA1)
Protein phosphatases and associated proteins [BR:
acyg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106048796 (BRCA1)
Ubiquitin system [BR:
acyg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106048796 (BRCA1)
Multi subunit type E3
BRCC complex
106048796 (BRCA1)
Chromosome and associated proteins [BR:
acyg03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
106048796 (BRCA1)
DNA repair and recombination proteins [BR:
acyg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
106048796 (BRCA1)
BRCA1-A complex
106048796 (BRCA1)
BRCA1-B complex
106048796 (BRCA1)
BRCA1-C complex
106048796 (BRCA1)
BRCA complex
106048796 (BRCA1)
FA (Fanconi anemia) pathway
Downstream FA components
106048796 (BRCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT_assoc
BRCT
zf-C3HC4
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_2
BRCT_2
zf-C3HC4_3
zf-Nse
BRCT_3
zf-RING_6
zf-RING_5
RING_XB3-XBAT31
zf-RING_10
zf-MIZ
zf-rbx1
zf-ANAPC11
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
106048796
NCBI-ProteinID:
XP_013056359
LinkDB
All DBs
Position
22:6625568..6649552
Genome browser
AA seq
1865 aa
AA seq
DB search
MAFLGPRDAVGECDWLFGYFGPRSMDLAVVAVGEVQNVLLAMQKNLECPICLDVVKEPVS
TKCDHIFCRFCMYKLLSRKKKGVVQCPLCKTEVTKRGLTENSRFKQLIEGLLEAIHAFEL
DTGVKFLNSHHLPKSSTEATTAKLPCNESSVIHSKGFRNRKRSAKENEQENCTLQGANVD
AQRTDTSVKRCSLRNRKQKCDFEKGVFIELGTDSSEELCKQAGSTGVGNKEVVQISSQEK
LEVPKSPEKGNEYSCDTRPTEPRAKEIILPNVIGESDFSKEALSKKSTQNVTEHANPDQV
NEMECQSSPLNILATDLLTERCDRIDNASPLKNGDTSFSKNAEEMDAEQTQCGNKSQEFD
LEDSSENRPDKSKEIDAVVQSVEDVEMCESENDSKKESPLEKLLQPETPHCPTLHQVSRK
RLKRSIQKVNEWFSKSNEILSSNSSHDDPAEASDVSGEGDALSDKDSCISEKTSPVVGFM
ETTVSEGNRRWSKEKTDSIKDKIFGKTYERERKSNPPIIMKEILPTTKKEDVPAVQECLN
NSRKDSLKRKRKAARHLQPEDFIKKKDVEEAGGCPQNVNLCLGDAEKKKCDESSAVKENP
PPEKRKSSTLAEFEGGSMSKNATEKVTCEHSNGELELNNSDQKSTKNTSSAAKRCRRSTR
TMCALQLVVDKNSGSPDPAETLIESYPSSEEPRNVDSEQRQVRRSRRLQLLSEEMTKETA
KRVVMKEASKCDSDREGSVFGVEKTALVRDSECKDLCEQQGILSCKPLTNLESADMEANA
VQISPENSSETTETGKSLFNPAPSHQHSNLNSSSPKAGSQEGEMLGNHFRLQSPSKTVVQ
TASHLPEGKRAEPCTTLPQDKERCTQNVPEGLGTEKSPMAKNVSEPTKESEDSELDTQYL
RNIFRNSKRLSFSLYPTPRKACEVDGVASEKLKISCAAQVEKRHGKYLNTENLHEEKTAE
NLSDVCEREKMKSYESACASPVSCTVSNAECARSGDCQDVSQVANRGNLMTPVRMGAARS
EGKNRPQKGERRSEKTASTDVGVESALRRNPIKSSRSQSDQSNTEEHIFQRTDLNTVSET
CFSSESDQAEKAEFVDSEGPVLCFQPGSMACPTACQQRSAEFNCKDTEKRSSKRRQVKGD
KEQSTQTASIGVPECLVAETLEEPFKGSGDCTDTSETPDGLMCSDDDSEENVSFCEARRK
DSSAVFVKSDLVKERNSGGGSSKLRSTRIRRSRRRAQKLQSSSEESSEDDDLPCFQALMF
GKSVSTPLQTNKQTTSAVGSSGNPSALPRGGSHEDNNVQKTPDAALSNGCASPSQESECS
VNLFSSQSNVSEESADGAQELKKPLLQVHASKQPSNVSESKESLQSCTGGLKRRKTNSKD
ECQEDPNQGTNLGEASGYDSETSHVGDSCGPFSQGEILSTQQKNAMQNNLKKLQQEMAAL
EAVLQQHGSQDSELLPSFAVEQMRQRGAESTSEGNFANHKCSTSTGFSADDVHVTPSDSS
NSEVKELGIERSPEQPYASLKSVRSKRLDLEEDLQRDSVMENKAPQETKPVQEAVQEYSQ
SEEENADEKSGTKLNKASVLNDLCGNVTRSPNASSSFVKPPHLQTAEATNSSALAQNDDK
SRSQGCKLKRSVCFPTSVLHNAAGKENATSPVVTNRKKMSIVASGLNQTEHMVVQKFARK
SQSTFSNHITDGTTHVIMKTDKELVCERTLKYFLGIAGRKWVVSYQWVIQSFKEGMILDE
ENFEVRGDVINGRNHQGPKRARQSLTEKIFKDFEICCYGPFTDMTTGHLEWMVELCGASV
VKQLHLFTHKTNSTAVVVVQPDAWMEGTSYKAIQQKNNVAVVTREWVLDSVACYECQELD
AYLVS
NT seq
5598 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttctcggaccgcgtgacgcagtcggcgagtgcgattggctgttcgggtatttc
gggccgcgaagcatggacctggccgtggttgccgttggagaggtgcagaacgtgctcttg
gctatgcagaagaacttggagtgccctatttgcttggatgtagtgaaagagccagtttca
acaaaatgtgatcacatattctgcaggttttgtatgtacaaactcctcagtagaaagaaa
aaaggtgtggtacagtgtcctctgtgtaagactgaagttactaagagaggtcttacagaa
aattccagatttaagcagctgatcgaaggactgctggaagctatccacgcatttgagctt
gacactggagtaaaatttttaaacagccatcaccttccgaaatcatccacagaagccact
actgcaaagcttccatgtaatgaaagttctgtcatccatagtaagggcttcagaaacagg
aaaagaagtgctaaagaaaatgaacaagaaaactgcaccttgcagggagctaatgtggat
gcacagcgtacagacaccagtgtgaaaaggtgttccctaagaaaccgaaaacagaagtgt
gactttgaaaaaggagtatttatagagcttggcactgattcatctgaagagctttgcaaa
caggcaggcagtactggggtaggaaacaaagaagtggttcagatttcatctcaagaaaag
ctagaagtacctaagagccctgagaaggggaatgaatattcttgcgatacacgacctacg
gagccgagagctaaagaaataattctaccaaatgtcataggtgaaagtgatttctcaaag
gaagccttgagcaagaaaagcacgcaaaacgtcactgaacatgccaatcctgaccaagtg
aacgagatggaatgccagagttctcctttaaacattcttgccacagacctgctcacagag
aggtgtgacagaatagataatgccagtcccttaaagaacggggacacatctttttctaag
aatgcagaagaaatggatgcggagcaaactcagtgcggtaataaaagccaagagtttgac
ttagaagacagctcagagaacagaccggataaaagcaaggaaatagatgctgttgtgcaa
agtgtggaagatgtggaaatgtgtgaatctgagaatgattctaaaaaagaatctcccctg
gagaagctccttcagccagagacaccacactgtcctacgctgcatcaggtctctaggaag
agattgaaacgaagcattcagaaagtcaatgaatggttttcaaaaagcaatgagattcta
tcttccaattcatcccatgatgatcctgctgaggcaagtgatgtttcaggtgaaggagat
gctttatcagataaagattcatgtatttcagagaagactagccctgtggtaggcttcatg
gaaactacagtgtctgaaggaaacaggagatggtccaaagaaaaaacagacagcatcaaa
gacaaaatatttggtaaaacatatgagagagagaggaagtcaaatccccctattatcatg
aaagagatcttacctactacaaaaaaggaagatgtgcctgctgttcaggagtgcttgaat
aattccagaaaagacagcctaaaacgaaaaaggaaggctgcccgtcacctacagcctgag
gacttcatcaagaaaaaagatgtagaggaggcaggtggatgccctcaaaatgttaacttg
tgccttggagatgctgaaaagaaaaaatgcgatgaaagttctgctgttaaggagaatccc
ccgcctgagaaaagaaagagtagtacgctagcagaatttgagggaggatccatgtcgaaa
aatgctactgaaaaggtgacgtgcgagcactccaatggagagctagaactgaataactct
gatcagaagagcactaaaaatacaagttctgcagcaaaaagatgcaggcgttcaactaga
actatgtgcgctttacagttagtggtggataaaaactctggttcccctgatccagctgag
acactgattgagagctacccaagcagtgaagaaccgaggaatgttgattctgagcaacgg
caagtcaggcgcagcaggaggctccagttactttctgaagaaatgacaaaggagacggca
aaaagggtagtaatgaaggaagcaagcaaatgtgacagtgaccgggaagggtctgtcttt
ggagttgaaaagactgcgttagttcgtgattctgaatgcaaagacctgtgtgagcagcag
ggtatattgagttgcaagccactcaccaatctggagagtgctgatatggaagcaaatgca
gtacagattagtccagaaaattcatccgagactacagaaactggaaaaagtctattcaat
cctgcaccttcacaccagcattcaaatttgaattcctcttcacccaaagcaggttcgcaa
gaaggtgagatgctaggtaaccatttccgcctacagtctccttcaaagactgttgtgcaa
actgcttcccacctgcctgaagggaagagggctgaaccgtgtactactttaccccaggac
aaagagcgctgtacgcaaaatgttccagagggcctcggaactgaaaagtcaccgatggct
aaaaatgtttcagaaccgaccaaggaatctgaagacagtgagctagacacacagtatctg
cgaaatatatttaggaattcaaagcgtctatcatttagcctttatcctactcccaggaaa
gcatgtgaagtagatggtgttgcatctgagaagctaaaaatttcatgtgctgctcaggta
gaaaaaaggcatggtaaatatttaaatacagaaaacttgcacgaagagaaaactgccgag
aacttgagtgatgtttgtgagagagagaagatgaagagctatgaatctgcttgtgctagt
ccggtgtcgtgcactgtcagcaatgctgaatgtgcacgctctggggactgtcaagatgtt
tcacaggttgctaatcgagggaatttgatgacaccggtaagaatgggtgctgctaggagt
gaaggcaaaaacagaccacaaaagggagagcggcgaagtgaaaagacagcgtcaactgat
gtaggggtagaaagcgcattgagacggaatccaatcaaaagcagtagaagtcaaagtgat
cagagtaatacagaagagcacattttccagaggacagatcttaacacagtcagtgaaacg
tgcttcagttcagaaagcgatcaagcagaaaaagctgaatttgttgacagcgaaggacca
gtgctatgttttcagcctggatcaatggcttgtcctacggcttgtcagcaaaggtctgca
gaattcaactgcaaagacactgaaaaaagaagtagcaaaagaagacaggtaaagggtgat
aaagagcaatcaacccaaactgccagcataggggtgccagagtgtttagttgcagagact
ctagaagaacctttcaaaggcagcggtgattgtacagatacgtctgaaacccccgatggc
ttaatgtgctccgatgatgatagtgaagagaacgtcagcttttgtgaagctcgtaggaaa
gacagttctgccgtgtttgtaaaaagtgacttggtgaaagaacgaaacagcggaggtggt
agttccaagctacgatctacaaggattcggaggtctcggagaagggcacagaaactgcag
tcttcatctgaagaatctagtgaggatgacgacttgccatgttttcaggcattaatgttt
ggcaagtcagtaagcacacctttgcagaccaataagcagacgacgtctgcggtggggtct
tcaggaaatcccagtgcgttgcctcggggtggaagtcatgaggacaacaacgtgcagaaa
acacctgacgctgccctaagcaatggctgtgcttcaccaagccaggagtcagaatgctct
gtgaacttgttttcttcccagtccaatgtgtctgaagagtcagctgatggagcacaggag
ctgaagaaacctttattacaagttcatgcgtccaaacaaccaagcaatgtgagcgagagc
aaagaaagccttcaaagttgcactggagggctgaagagaagaaaaacaaactccaaagat
gaatgccaagaagacccaaaccaggggacaaacctaggtgaagcatctggatatgacagt
gaaacaagtcatgtaggggattcatgtggaccattctctcagggtgaaatcctttctaca
cagcagaagaatgctatgcagaacaacctgaaaaagctacaacaagaaatggctgcgctt
gaagcagtgctacagcaacatggaagtcaggactccgagctcttaccctcatttgcagtg
gaacaaatgaggcaaagaggagcggagtcaacctcggaaggaaattttgcaaatcacaaa
tgcagcacttcaacgggattttcagccgatgatgtccatgttacaccaagtgattcttct
aacagtgaagtaaaagagttaggaattgaaaggtctcctgaacagccgtatgcctctctg
aaatccgttcggtcaaagagactggatttggaggaagaccttcagcgtgatagtgtcatg
gagaacaaagctcctcaagagacaaagcctgtgcaggaagcagtgcaagaatatagtcag
agtgaagaagaaaatgcagatgagaagtctgggactaaattaaacaaggcatctgtctta
aatgatctctgtggaaatgtgaccaggagtccaaatgcctcttcttcctttgtaaagcct
cctcaccttcaaactgcagaagcaacaaatagttctgctctagctcagaatgatgataaa
agccgttcccaaggatgtaaactgaagagaagtgtgtgttttcctacatctgtcctgcac
aatgcagctgggaaagaaaatgctacaagtccagttgtgactaacaggaagaaaatgtca
attgtggcatcaggtctgaatcaaactgaacatatggtggtccagaagtttgccagaaaa
tctcaaagcactttctctaatcacattactgatggaacaacacacgtcataatgaaaaca
gataaggagctggtgtgtgagcggacgttgaagtactttctgggtattgcaggaagaaaa
tgggtagttagttatcagtgggtaattcagtcttttaaagaaggaatgatactggatgag
gagaactttgaagttagaggagatgtaatcaatgggagaaaccaccaaggtcctaagaga
gcgagacagtctctgactgaaaagatctttaaagactttgagatctgctgctatggtcct
ttcactgatatgactacagggcatcttgaatggatggtggagctttgtggtgcctctgta
gtgaagcaacttcatctgttcacccacaaaacgaattccactgctgttgtggttgtgcag
ccagatgcttggatggaaggcacaagctataaagcaatccagcaaaagaacaatgttgcc
gtggtgactcgagagtgggtgctagacagcgttgcttgctacgagtgccaggagcttgat
gcttacctcgtgtcctaa
DBGET
integrated database retrieval system
