Anser cygnoides (swan goose): 106049268
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Entry
106049268 CDS
T04896
Symbol
SETDB1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X4
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg00310
Lysine degradation
acyg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
106049268 (SETDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
acyg03036
]
106049268 (SETDB1)
Enzymes [BR:
acyg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
106049268 (SETDB1)
Chromosome and associated proteins [BR:
acyg03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
106049268 (SETDB1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
106049268 (SETDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5604
Tudor_4
Tudor_5
SET
MBD
Pre-SET
Chromo_MORC2_6th
DUF4537
Phage_TTP_16
WHD_PARP12
Motif
Other DBs
NCBI-GeneID:
106049268
NCBI-ProteinID:
XP_047910573
LinkDB
All DBs
Position
33:189303..207910
Genome browser
AA seq
1278 aa
AA seq
DB search
MDSQEIKELQQEVMEELGISMEELQDIIDEELEKFECVKQRKQQLEELEKCVKQKEEEVA
HVDRLFDDASRAIDKCEILVKDLYSKLGLQYRESSSEDEDLAAKPTEVIEIPDEDDDDVM
SIDLGWKNSDTNPKIVKDQTLLREAMAAMRKSAQDVQKFMDAVNKKTNAQDALKDVQTPQ
QTPATLPSVGPAAAGSDLSNDGDLNIGMRILGKKRTKTWHKGTLIAIQSVGAGKKYKVKF
DNKGKSLLSGNHIAYDYHPSPEKHYVGSRVVAKYKDGNQVWLYAGIVAETPNMKNKDRFL
IFFDDGYASYVKEWELYPICRPLKKTWEDIEDVSCRDFIEEYITAYPNRPMVLLKNGQLI
KTEWEGTWWKSRVEEVDGSLVKILFLDDKRCEWIYRGSTRLEPMFSMKTSTASTQEKKQS
GQARTRPNVGAVRSKGPVVQYTQDLTGAGTQYKPLEQMQAASLAARSNSPQHAEMECSDS
QLAQSRKQVAKKSTSFRPGSVGSGQSSPSSPVLSDTPPAGRTGASQQHRFSSGQAGAGTA
QTFHGMMDRVPNEPSYRAPLEKLFYLPHVCSYTCLSRVRPIRSDQYRSKNPLLIPLLYDF
RRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFETDCDFLFLEMFCLDPYVLVDR
KFQPYKPYYYIADITKGREDVPLSCVNEIDNTPPPQVAYSKERIPGKGVYINTSWEFLVG
CDCKDGCRDKSKCACHQLTVQATGCTPGGQINPNSGYQHKRLEECLPTGVYECNKRCKCN
INMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDFADKEGLE
MGDEYFANLDHIESVENFKEGYESDAKCSSDSSGVDLKEEEEENTGTEEQEESNEDSSDD
NFCKDEDFSTSSVWRSYATRRQTRGQKENGLSETASKDSGLTRQISHDEIAVAASCKLPV
SEETSKNKVASWLSSNSMSDGFQDNDSASSFKMSEGGEVKACKTDLPVEREKASAPVLGD
VDGESKALKKDEPEDSSKFPGLSDLGRMYGYNPSPPKLEGIRRPTSKTALLQSRRHSVPL
QPTTEDVLTLSSSTDSEGENGQTAAGQAQGTTNDSDDIQTISSGSEEEEGDDKKNSSGSG
PVKRQVAVKSTRGFALKSTHGIAIKSTNMAVADKGESVPVRRTTRQFYDGEESCYIIDAK
LEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVE
GKELLCCCGAIECRGRLL
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atggattcccaggagatcaaagagctgcagcaagaagtgatggaggaactggggatctcc
atggaagagctccaggacatcatcgacgaggagctggagaagtttgaatgcgtaaagcag
aggaagcagcagttggaggagctggagaagtgtgtgaaacagaaggaagaagaggtggct
catgttgaccggctctttgatgatgcttcgagagccattgataaatgtgagatactggta
aaagatctgtactccaagctaggcctccagtatcgcgagagcagttctgaagacgaggac
ttggccgccaagcctacggaagtgattgagatcccagatgaggatgatgatgatgtcatg
agtatcgatttgggctggaagaacagtgatactaatcccaaaattgtaaaggatcagact
ctgctgcgtgaagccatggctgcaatgagaaaatctgcccaggatgttcagaaatttatg
gatgctgtgaacaagaaaacaaatgcccaggatgcactaaaagatgtgcagacccctcag
caaactcctgccactctcccgtctgttggacctgctgcagctgggagcgatctcagcaat
gatggtgatctgaacattggcatgaggatcctgggcaagaagagaaccaaaacatggcac
aaaggaactctgattgccatccagtctgtcggtgctggtaagaagtacaaagtaaaattt
gacaacaaagggaagagtttgctttctggcaatcatattgcttatgactatcacccctcc
ccggagaaacactacgttgggagcagggttgtggcaaagtacaaagatgggaatcaggtt
tggctgtacgctggcattgtggctgaaaccccaaacatgaagaataaagacaggttcctg
atcttctttgatgatggctatgcttcatatgtcaaggagtgggagctgtacccaatctgc
aggccacttaaaaagacttgggaagacatagaagatgtttcttgtcgtgatttcattgag
gagtacatcacagcctaccccaaccgtcccatggtgctgctgaagaatggccagctgatc
aaaacagaatgggaggggacctggtggaaatccagagtggaagaagtggatggcagcctg
gtcaaaatccttttcctggatgacaaacgctgtgagtggatttaccggggttccacacgc
ctcgagcccatgtttagcatgaaaacttccacagcctctacccaagaaaagaagcaaagt
ggacaagcaagaactcgtcccaatgtcggtgctgtccggagcaaagggcctgtagtacaa
tatacacaagatttaaccggagccggtactcagtacaaacccctagagcaaatgcaggca
gcttcgctggctgcacggtccaattctccacagcatgctgagatggaatgctctgacagt
cagctggcccagtcgagaaagcaagtggccaagaaaagcacttccttccgtcctggctct
gtgggctctgggcagtcttcaccttcttcacctgttctaagtgatacacctcctgccgga
aggaccggcgcatcccagcaacatcggttctcaagtggccaggcaggcgctggcacagca
cagaccttccacggcatgatggaccgtgtgcccaatgagccctcttaccgagccccgctg
gagaaactattctacctgccgcatgtctgcagctacacctgcctgtcccgcgtccgtccc
atccgcagcgatcagtaccgcagcaagaatcccctgctcatcccgctgctctacgacttc
aggcggatgacagcccgcagacgggttaaccgcaagatgggcttccatgtcatctacaag
acaccgtgcgggctgtgcctgcgaaccatgcaggaaattgagcgctacctttttgagaca
gactgtgacttccttttcctggagatgttctgcttggacccatatgtgctggtagatcgc
aagttccagccctacaaaccctactactacattgcagacattaccaagggaagggaggat
gtgccactgtcttgtgtcaatgagattgataacaccccgccaccacaggtggcctacagc
aaagagcgcatcccaggcaaaggggtgtacatcaacaccagctgggagttcctcgtgggc
tgtgactgcaaagacggctgcagagacaaatcaaaatgtgcttgtcaccagctgacagtc
caagcaactggctgcactccaggtgggcagatcaaccccaattcaggataccaacacaaa
aggctggaagaatgcctcccaacaggggtttatgagtgtaacaagagatgcaagtgcaac
attaacatgtgcaccaatcgcttggtccaacatgggctccaagtccggctacagttattc
aagactcagaacaaaggctggggcattcgttgccttgatgatattgctaaaggctctttt
gtctgcatctatgcagggaaaattctcacagatgactttgctgacaaagagggattagag
atgggtgatgaatattttgcaaacctggatcacattgagagcgtggagaacttcaaggag
ggctacgagagtgatgcaaaatgctcatctgacagcagtggagttgacctcaaggaagaa
gaggaggaaaacacaggcactgaggagcaggaggagtccaatgaggacagctctgatgac
aacttctgcaaggatgaggacttcagcaccagctcggtatggcgcagctatgcgacacga
cggcagacacgtggccagaaagagaacgggctgtcggagacagcctccaaggactcaggg
ctcacccggcaaatcagccacgatgagatcgcagtagctgcctcctgtaagctgccagtg
tcggaggagacctccaaaaacaaagtagcctcgtggctaagctccaacagcatgtccgat
ggcttccaggacaatgacagtgcctcatccttcaagatgagcgagggtggtgaagtcaag
gcctgcaaaacagatctccctgttgagagagagaaagcatctgctcctgtcctgggcgat
gtggatggagagtcaaaggcactgaagaaagatgaacctgaagattcaagcaaatttcct
gggctaagcgacttgggaaggatgtatggctacaacccgagccctcccaaactagaagga
atccggagaccgacgagcaaaacagccctgctgcagagccgacgacactctgtccccctg
cagcccaccacagaagatgtgctgaccctgtcaagcagcacagacagcgagggggagaac
gggcagacagcggcagggcaggcccagggcaccaccaatgacagcgatgacatccagacc
atttcgtcaggctctgaggaagaagaaggggatgacaagaaaaactcctccggctcaggt
cctgttaagaggcaggtggcagtgaaatccacccgaggttttgccctgaaatctactcat
gggattgccatcaagtcaaccaacatggcagtggccgacaagggggagagcgtacctgtc
cgcagaaccacgcggcagttctacgatggagaggagtcttgttatatcatcgatgccaaa
ctggaggggaacctgggccgttacctgaatcatagctgcagcccaaacctcttcgtgcag
aatgtttttgtggacacacatgacctccgcttcccctgggtcgccttctttgctagcaag
aggatacgagctggcacagagctgacatgggactacaactatgaagtgggcagtgtagaa
ggcaaagagctgctgtgctgttgcggggctattgagtgccgtgggcggctgctctga
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integrated database retrieval system
