Anser cygnoides (swan goose): 125180863
Help
Entry
125180863 CDS
T04896
Symbol
SMPD1
Name
(RefSeq) sphingomyelin phosphodiesterase
KO
K12350
sphingomyelin phosphodiesterase [EC:
3.1.4.12
]
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg00600
Sphingolipid metabolism
acyg01100
Metabolic pathways
acyg04142
Lysosome
acyg04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
125180863 (SMPD1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
125180863 (SMPD1)
09143 Cell growth and death
04217 Necroptosis
125180863 (SMPD1)
Enzymes [BR:
acyg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
125180863 (SMPD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
ASMase_C
Motif
Other DBs
NCBI-GeneID:
125180863
NCBI-ProteinID:
XP_066846252
LinkDB
All DBs
Position
1:212549703..212553166
Genome browser
AA seq
584 aa
AA seq
DB search
MAVGAGRAPPLALALALALPLSAALSPPGAALLEAAGPRWGWRNLTCPGCRLLFGALDLA
LQLEPNVARVGRVAAGLCQELRLARPEICRQAVQLFQRDVVAAWARSVLRPSEACGLLLG
PRCGHWDIFGAWNVSLPAAPKPPVRPPAPPPPGAPSARILFLTDLHWDRLYTPGSEPACP
DPLCCRGAARPGPGGAGFWGEYSKCDLPLHTIAALLAQLHHAGPFAAAYWTGDIPAHNVW
QQHREDQLLALRTVTALLRQHLGALPVYPAVGNHEATPVNAFPPPYVRGNQSSAWLYDAM
AEAWQDWLPPPALQTLRAAGFYTVQVWPGLRLVSLNMNFCSQANFWLLINSTDPAGQLQW
LVGVLEAAEQQGEKVHIIGHIPPAHCLRSWSWNYYRIVNRFEGTIAAQFFGHTHVDEFEM
FYDEETLTRPVSVAFVAPSVTTYINLNPGYRVYEVDGAYNGSSHAVLDHETFILNLTEAN
MPGAEPHWQRLYHAREAYGMATAFPADWDLLIRRFQDDEHLFQRFWYHFHKGHPPREPCL
EACKAALLCALRTGRSADPSLCRVLRPARPFRQILQLWRQRQLC
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgggcgcgggccgggccccgccgctggccctggcgctggccctggcgctgccg
ctgtcggcggcgctgtcaccgcccggcgccgcgctgctggaggcggcggggccgcgctgg
ggctggcgcaacctgacgtgcccgggctgccggctgctcttcggggcgctcgacctggcg
ctgcagctggagcccaacgtggcgcgcgtggggcgcgtggcggcgggcctgtgccaggag
ctgcggctggcgcgccccgagatctgccggcaggccgtgcagctcttccagcgcgacgtg
gtggccgcctgggcccgctccgtgctgcggcccagcgaggcctgcgggctgctgctgggc
ccgcgctgcggccactgggacatcttcggcgcctggaacgtctccctgcccgccgccccc
aagccgccggtgcggcccccggcgcccccgccgcccggcgcgcccagtgcccgcatcctc
ttcctcaccgacctgcactgggaccggctctacaccccgggcagcgagcctgcctgcccc
gacccgctctgctgccgcggcgccgcccgccctggccctggcggcgctggcttctggggc
gagtacagcaagtgcgacctgccgctgcacaccatcgcggcgctgctggcccagctgcac
cacgctggccccttcgccgccgcgtactggacgggagacatcccggcacacaacgtctgg
cagcagcaccgcgaggaccagctgctggccctgcgcaccgtcaccgcgctgttgcgccag
cacctgggcgccctgcccgtctacccggccgtgggcaaccacgaggccacccccgtcaat
gcctttcccccaccctacgtgcgcggcaaccagtcctcggcgtggctgtacgacgcgatg
gctgaggcctggcaggactggctgcccccaccggcgctgcagaccctccgagccgctggc
ttctacacggtgcaggtatggcctgggctgcgcctcgtctcgctcaacatgaacttctgc
tcccaggccaacttctggctgctcatcaactccactgaccctgcggggcagctgcagtgg
ctcgtgggcgttctggaggccgccgagcagcagggcgagaaggtgcacatcatagggcac
atccctccagcccactgcctgcggagctggagctggaactactaccgcatcgtcaacagg
tttgaaggcaccatcgcagcacagttcttcgggcacacacacgtggatgagtttgagatg
ttctatgatgaggagaccctgacacgcccggtctctgtggcctttgtggcacccagcgtc
accacctacatcaacctcaaccccggctaccgcgtgtacgaggtggacggcgcctacaac
ggcagctcccacgccgtgctggaccacgagacgttcatcctcaacctcaccgaggccaac
atgcctggggcagagccgcactggcagcgcctctaccacgcccgtgaggcctacgggatg
gccaccgccttccccgccgactgggacctgctcatccgccgcttccaggatgacgagcac
ctcttccagcgcttctggtaccacttccacaagggtcacccgccccgcgagccctgcctg
gaggcctgcaaggcagccctgctctgcgcgctgcgcaccggccgctcggccgaccccagc
ctctgccgggtgctgcgcccagcccggcctttccggcagatcctgcagctctggcggcag
cggcagctctgctga
DBGET
integrated database retrieval system