KEGG   Alternaria dauci: 96082748
Entry
96082748          CDS       T10615                                 
Symbol
ACET3X_002426
Name
(RefSeq) hypothetical protein
  KO
K12622  U6 snRNA-associated Sm-like protein LSm3
Organism
adac  Alternaria dauci
Pathway
adac03018  RNA degradation
adac03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:adac00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    96082748 (ACET3X_002426)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    96082748 (ACET3X_002426)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:adac03019]
    96082748 (ACET3X_002426)
   03041 Spliceosome [BR:adac03041]
    96082748 (ACET3X_002426)
Messenger RNA biogenesis [BR:adac03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     96082748 (ACET3X_002426)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     96082748 (ACET3X_002426)
Spliceosome [BR:adac03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    96082748 (ACET3X_002426)
 Complex C
  U2 snRNP components
    96082748 (ACET3X_002426)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 96082748
NCBI-ProteinID: XP_069308973
UniProt: A0ABR3URE2
LinkDB
Position
2:join(1078413..1078523,1078581..1078713,1078765..1078811)
AA seq 96 aa
MDEKEETNEPLDLVRLCIDEVVIVKLRGDRELKGRLHAYDSHCNLVLGDVEETIYIAEEE
DDDQEPRVRTVKKQSEMLFVRGDSVVLIAPAEGASQ
NT seq 291 nt   +upstreamnt  +downstreamnt
atggacgaaaaagaagagaccaacgaacccctcgaccttgtgcgcctctgcattgacgaa
gttgtcattgtaaaactacgcggcgaccgcgagctaaagggcagactacatgcatacgac
tcgcattgtaaccttgttctcggagacgtggaagaaactatatatattgcagaggaagag
gatgacgaccaggagccccgcgtgcggacggtcaagaagcagagcgagatgctgttcgtc
agaggcgactcagtagtcttgatcgcaccggctgaaggagcatcgcaatga

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