Alternaria dauci: 96083760
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Entry
96083760 CDS
T10615
Symbol
ACET3X_003438
Name
(RefSeq) hypothetical protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
adac Alternaria dauci
Pathway
adac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
96083760 (ACET3X_003438)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adac03019
]
96083760 (ACET3X_003438)
Messenger RNA biogenesis [BR:
adac03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
96083760 (ACET3X_003438)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
AAA_15
AAA_23
AAA_25
FtsK_SpoIIIE
DUF3584
PduV-EutP
AAA_28
ORC-CDC6-like
SRP54
AAA_22
RsgA_GTPase
Zeta_toxin
Arf
AAA_13
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
96083760
NCBI-ProteinID:
XP_069309985
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Position
2:complement(join(4270737..4271461,4271512..4271653))
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AA seq
288 aa
AA seq
DB search
MSNTANNKEIAPSIDVKNLSYAFPDGSSGLKDVFLDLPPGSRTLLIGANGAGKTTLLRLL
SGKRMAPSGTVHIAGIDPFKMGLEGVTYLGLEWVLNPIVRTDIDVPTLLSSIGGDHYTER
RDELVRILDIDLSWRMHAVSDGERRRVQLAMGLLRPWTILLLDEITVDLDLLSRSNFLNF
LKKETQERPCTIVYATHILDNLATWPTHLVHMSLGKVKKWGSTEEMDVKVEQGERMYTGN
SQLGELVLKWLQEDLTERGPRNGKGEGATYQSLEGKGGYGAEKRVEDK
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacacagccaacaacaaggagattgcgccgtcaatcgacgtgaaaaacctcagc
tatgccttccctgatggctcaagtgggctgaaggatgttttcctggatctaccgcctggg
agcaggacacttctaatcggagccaatggcgcgggtaaaaccacgcttctccgcctcctc
tctggcaagcgcatggccccctccggcaccgtccacatcgcgggcatcgaccccttcaag
atgggtcttgagggcgtgacctaccttggtcttgaatgggtgctcaaccccattgtccgt
accgatatcgacgtgcccacgcttctgtcctccattggtggcgatcactacaccgagcgc
cgcgacgagctcgtacgcatactcgatatcgacctcagctggcgcatgcacgccgtatcc
gatggcgagaggaggcgtgtacaactcgccatgggtctgctgcgaccgtggaccatcttg
ctgttggatgagatcaccgtcgatctcgatctgctgtcgcgtagcaacttcctcaacttc
ctgaagaaggagacacaggagcgtccatgcaccatcgtgtacgcgacgcacatcttggac
aacctcgcgacatggcccacacatctcgtgcatatgagcttgggcaaggtcaagaagtgg
ggtagcaccgaggagatggacgttaaggtcgagcagggcgagcgcatgtacaccggaaac
agccagctgggcgagctggtcttgaagtggctgcaggaagacttgacagagagaggccca
agaaacggaaagggtgagggagcgacataccagagtctagagggcaaaggtggctatgga
gctgagaagagggtggaggacaagtga
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