KEGG   Alternaria dauci: 96088415
Entry
96088415          CDS       T10615                                 
Symbol
ACET3X_008093
Name
(RefSeq) hypothetical protein
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
adac  Alternaria dauci
Pathway
adac03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:adac00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    96088415 (ACET3X_008093)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:adac03019]
    96088415 (ACET3X_008093)
   03041 Spliceosome [BR:adac03041]
    96088415 (ACET3X_008093)
   03032 DNA replication proteins [BR:adac03032]
    96088415 (ACET3X_008093)
Messenger RNA biogenesis [BR:adac03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     96088415 (ACET3X_008093)
Spliceosome [BR:adac03041]
 Complex A
  U1 snRNP components
   Sm proteins
    96088415 (ACET3X_008093)
  U2 snRNP components
    96088415 (ACET3X_008093)
 Complex B
  U1 snRNP components
    96088415 (ACET3X_008093)
  U4/U6.U5 tri-snRNP components
    96088415 (ACET3X_008093)
 Complex C
  U2 snRNP components
    96088415 (ACET3X_008093)
DNA replication proteins [BR:adac03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     96088415 (ACET3X_008093)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 96088415
NCBI-ProteinID: XP_069303695
UniProt: A0ABR3U9F5
LinkDB
Position
8:join(480969..481001,481142..481213,481264..481675,481725..481834)
AA seq 208 aa
MSGAANRQGKMINYRMKVTLQDGRQMVGQMLAFDKHMNLVLADTEEFRRTRRRGKAAPGA
TQQVTETEERRAIGLTIIRGAHVISLSVDGPPPADPAARLGANAGGPSTAAALAAGPGVA
RPAGRGLPVGLTGPAPGVGGPGPGFGGGFPGAPGGFGGPPGFPGRGGPPGGPPGFPPAGG
PPGFGAPPGFGGPPGFPGRGGPPGFGGR
NT seq 627 nt   +upstreamnt  +downstreamnt
atgtctggcgccgcaaaccgccagggaaagatgatcaattaccgcatgaaggtcactctg
caagatggcagacaaatggtcgggcagatgctcgcattcgacaagcacatgaacctcgtt
ctcgccgacacagaagagttccgacgcacacgaagaaggggcaaagccgcacccggcgca
acccagcaagtcaccgagactgaagagcgacgcgcaattggactcaccattattcgtggc
gcgcatgtaatctcgttgtctgtcgacgggccgccgcctgcagaccctgccgcgcgactt
ggtgcgaacgctggaggaccgtctactgctgctgcgctggctgccggacccggtgttgct
cgtcctgctggccgtggtctcccagtcggtcttactgggccagctcctggtgttggaggc
cctggccctgggttcggcggcggcttcccaggtgcacctggaggctttggaggcccgcct
ggcttccctggtcgtggcggccctcctggtggaccacctggattccctcccgctggtgga
cctcccggattcggtgcaccaccaggcttcggtggaccgcccggtttcccaggtcgcggt
ggacctcctggtttcggtggcaggtag

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