Anaeromyxobacter dehalogenans 2CP-C: Adeh_0693
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Entry
Adeh_0693 CDS
T00326
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
ade
Anaeromyxobacter dehalogenans 2CP-C
Pathway
ade03030
DNA replication
ade03410
Base excision repair
ade03420
Nucleotide excision repair
ade03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ade00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Adeh_0693
03410 Base excision repair
Adeh_0693
03420 Nucleotide excision repair
Adeh_0693
03430 Mismatch repair
Adeh_0693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ade03032
]
Adeh_0693
03400 DNA repair and recombination proteins [BR:
ade03400
]
Adeh_0693
Enzymes [BR:
ade01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
Adeh_0693
DNA replication proteins [BR:
ade03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Adeh_0693
DNA repair and recombination proteins [BR:
ade03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
Adeh_0693
NER (nucleotide excision repair)
GGR (global genome repair) factors
Adeh_0693
MMR (mismatch excision repair)
DNA ligase
Adeh_0693
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Adeh_0693
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
Nlig-Ia
PTCB-BRCT
HHH
5_3_exonuc
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
ABC80469
UniProt:
Q2INT9
LinkDB
All DBs
Position
805683..807746
Genome browser
AA seq
687 aa
AA seq
DB search
MKKADAAARARDLRERIRAADHAYYVLDQPVLADAEYDRLMHELQAIEAEHPELVTADSP
TQRVSGAPSERFERVVHREPMLSLGNVQSDDELHEFDARVRRLLGLPEGEAVGYVVEPKL
DGLAVELVYRDGAFTGGSTRGDGVNGEDVTANLRVVGGLGANRGVPHALEGTPPPRVEVR
GEVLLFKEHFEAMNRQLVRAGDEPFANPRNAAAGTLRQLDWRVTARRPLSFVAYEALVPG
GDPWRTHWEKLEALAAWGFETNPENRRCRGLGEVLAYRDRMAERRFELPYDTDGIVVKVD
DLDWRRRLGAASKFPRWAVAFKYPPQEEATRIRRIWASVGRTGVLTPVVDFDPVRLSGAM
VARATLHNEDEMRRKDILEGDWVLVRRAGEVIPEVVKPLPERRTGEERPFRFPAECPVCG
ARVVREEGEKVYRCTGAACPAQLVGRICHFAQRRALDIEGLGEKLAAGLVERGQVKDFAD
LYAVPFEVWQQLFSRPRKEQDAGAARELPEKSAQNMVAALERSRSTTLRRFLFALGIPQV
GEATAATLARHFGDLARILDADEEALKGVRDVGPETASEIRAWTQEPQNRRVVERLLAAG
VRPEPEVVEARGPFAGKTVVLTGGLSAMSRDDAKAEVERRGGKVSGSVSRKTDLVVAGEE
AGSKLEKARSLGVRVVGEEEFVRLLKE
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaggccgacgccgcggcgcgcgcccgcgacctgcgcgaacggatccgcgcggcg
gaccacgcctactacgtcctcgaccagcccgtcctcgccgacgccgagtacgaccggctg
atgcacgagttgcaggcgatcgaggccgagcacccggagctcgtcaccgcggactcgccc
acgcagcgggtctccggcgcgccctcggagcgcttcgagcgcgtggtgcaccgcgagccc
atgctctcgctcggcaacgtgcagagcgacgacgagctgcacgagttcgacgcgcgcgtg
cgccggctgctggggctgcccgagggagaggcggtcggctacgtggtggagccgaagctc
gacgggctcgcggtggagctggtgtaccgcgacggcgcgttcacgggcggctccacccgc
ggcgacggcgtcaacggcgaggacgtcaccgcgaacctccgggtggtgggcggcctgggc
gcgaaccgcggcgtgccgcacgcgctcgaggggaccccgccgccgcgggtcgaggtccgc
ggcgaggtgctgctgttcaaggagcacttcgaggcgatgaaccggcagctggtccgcgcc
ggcgacgagccgttcgcgaacccgcgcaacgccgccgccgggacgctgcgccagctcgac
tggcgcgtcaccgcccgccgcccgctctccttcgtcgcctacgaggcgctggtgccgggc
ggcgatccctggcgcacgcactgggagaagctggaggcgctcgccgcctggggcttcgag
accaacccggagaaccgccgttgccgcggcctcggcgaggtgctcgcctaccgcgaccgc
atggccgagcgccgcttcgagctgccctacgacaccgacggcatcgtggtgaaggtggac
gacctcgactggcggcgccggctgggcgcggcctcgaagttcccgcgctgggccgtcgcc
ttcaagtacccgccgcaggaggaggccacccggatccgccgcatctgggcgtcggtgggc
cgcaccggcgtgctgacgccggtggtggacttcgacccggtccgcctctccggcgcgatg
gtcgcgcgcgccacgctgcacaacgaggacgagatgcgccgcaaggacatcctcgagggc
gactgggtcctggtgcggcgcgccggcgaggtgatcccggaggtggtgaagccgctcccg
gagcgccgcaccggcgaggagcggccgttccggttcccggccgagtgcccggtgtgcggc
gcgcgggtggtgcgcgaggagggcgagaaggtctaccgctgcaccggcgccgcctgcccg
gcgcagctcgtgggccggatctgccacttcgcgcagcgccgcgccctcgacatcgagggg
ctgggcgagaagctcgccgcgggcctggtggagcgcgggcaggtgaaggacttcgccgat
ctgtacgcggtgccgttcgaggtctggcagcagctgttcagccgcccgcgcaaggagcag
gacgcgggggcggcgcgcgagctgcccgagaagagcgcgcagaacatggtcgcggcgctg
gagcgatcgcggagcaccacgctgcggcggttcctgttcgcgctcggcatcccgcaggtc
ggcgaggcgaccgcggcgacgctggcccgccacttcggcgacctcgcccggatcctggac
gcggacgaggaggcgctgaagggcgtccgcgacgtgggcccggagaccgcgtcggagatc
cgcgcctggacccaggagccgcagaaccggcgggtggtcgagcggctgctcgccgcgggg
gtgcggccggagcccgaggtggtggaggcgcgcggcccgttcgccggcaagacggtggtg
ctcacgggcggcctgtcggcgatgtcgcgcgacgacgcgaaggccgaggtcgagcggcgc
gggggcaaggtgtcgggcagcgtctcgcggaagaccgacctggtcgtggcgggcgaggag
gccggctccaagctggagaaggcgagatcgctgggcgtgcgggtcgtcggcgaggaggag
ttcgtgcgcctgctgaaggagtga
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