Acropora digitifera (stony coral): 107330334
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Entry
107330334 CDS
T04352
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein 1-like
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
adf
Acropora digitifera (stony coral)
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
adf03036
]
107330334
03400 DNA repair and recombination proteins [BR:
adf03400
]
107330334
Chromosome and associated proteins [BR:
adf03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
107330334
DNA repair and recombination proteins [BR:
adf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
107330334
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_SMCHD1_6th
Ig_SMCHD1_1st
Ig_SMCHD1_8th
Ig_SMCHD1_2nd
Ig_SMCHD1_4th
Ig_SMCHD1_7th
Ig_SMCHD1_5th
SMC_hinge
Big_1
Motif
Other DBs
NCBI-GeneID:
107330334
NCBI-ProteinID:
XP_015750451
LinkDB
All DBs
Position
Un
AA seq
1338 aa
AA seq
DB search
VQFIDFQGQIKRPDLPQKRNQSPWCVFNSIEWDGKIFKVGQLIRTQRTVPLICGTVKRFL
LFGDHDGDVFATGGEMEIVQEPVSLYGDRKFFSLAKLDRSITLASIKKFVDDEEAKLPSK
LIIEWPEQNKLEHNSKIPAGTTIGAMRVDILNGKGESVNKLPGDRKRLLVELKVIWHGTS
MDKDGDKIITNHVCQHGGKSWPYWFRKMENITHLGPHTLQLQVLLSDSSTAPSFKSLPCH
RIKFTVTEAHPNKFTVGMLETPLRVGVPFQIPLNLLDVFNNPSKLSKEISPVLSASGLEL
THQGTLVKVNSLVVKGVVALGSVPSHAGKDFNLKITLPGLAEGSQSLKIRLLPGPPESLA
VTPGDAEITVENNSSLQLQVQVQDKAGNVTVHPRLNVVCKLTGLPSLPTYSGDCSSSGKA
TLTGADICLKHITKETRLKAKIELQHHKEVTPVEKTIIVTPSSKAAELEVFYSHQVNWTP
KVSKDLIKQGVLPDVKAPLSSDESKYCQVSMTGGAGLEFSFTLRPHADVPSVLKCSCHNP
YMRLGETLAADIILSVTDKHGNKTGKLPSHVLPEFHVSSDGLRESEVQLGFTADGNIVVK
NIQFEEGPLGHRELAIKWKEMICYQRIEVISGPPAKLKILDLDHSEPISVFNDTQMPHPL
TVQLCDKLGNHSDEANIKVVLNCDRGLKLTPTPAQQKTDSKGQATFGHLTVSAAKGMYGI
RIKALLGRISLDAPTVNVRVDPDPSKAVNLCVTFDSKAPCVVGELLPALSAHVVGEDDAV
MKPSSSRDIVLKIWHSKDGPVSDKPPARATTLYPSKSKSSDKDGEFYFRDLKVPDLAGDY
CMVVQFGSEGQVTLSSKPITFTAKAGRPVKLEPESIPATPTVSNTQRNNSRLLVKTLKLQ
LKDKFDNLTGENLKGKVVISVNSSSEGIDEIPALAGNLYSTEVPLVKGVATVQNLLIQEN
TAGKDGQEYLLNFSAQIPANASPHPIPPFTLAFLFYNDVRKQQQMAQLTKERDHLFETIR
TYRLLFETTRQLINEMQVSVNEASLQEQKIRGELRKQNIGASSLASVASVTSLITELSRK
RDEISTTPRRQCLLHPGPRGDSGILGKVAHLAQVVDDDVARVLSWHMASDMDCVVTLTTE
KAKQVYRDSKGQQQVLPLDSIFRRSLPEWNRCASSLFFVVYVVKYTHCPTILTRCGDRIR
SNGKFGGLQNKAPQLERMRGAVFAAPLPLAFHSLSTQIEQLQAYKQASIKHTQAKEELTQ
QLQHGQTEEMKVKHRECREAENQLRLIEERLGMTPTQYNMPPSPATMLLTEINTPPTRTS
VSRRSAARAAAAGAHPPK
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
gtccagttcatagattttcaaggtcagattaaacgcccagaccttcctcagaagcgaaac
caaagtccttggtgtgtcttcaactccattgagtgggatggaaagatctttaaagttgga
caactgataaggactcaaaggacagttccattgatctgcggaactgtaaagagatttctc
ctttttggtgaccatgatggagatgtgtttgcaacaggtggcgagatggagattgttcag
gagcctgtttcattatatggggacagaaagttcttttccttggctaagttggaccgctca
ataactcttgcttcaattaagaaatttgtggatgatgaagaagcaaagctgcccagtaag
ttgatcatagaatggccagagcaaaacaagctggaacataactcaaaaattcctgctgga
accaccataggagccatgagggttgatattctaaatggaaaaggtgaatctgttaacaaa
cttcctggtgacaggaaaaggttattggtggagttgaaggtcatttggcatggtacttct
atggacaaagatggagacaaaatcattaccaatcatgtctgtcaacatggtggaaaaagt
tggccttattggttcagaaaaatggagaacattactcaccttggtcctcacactctccag
ctgcaagttcttctcagcgacagctcaacagccccatctttcaaaagcctgccctgtcat
cgtattaagttcaccgtcacagaggctcaccccaataaattcactgttggaatgttggaa
accccattaagagttggagtaccatttcagattccacttaaccttcttgatgtgttcaac
aatccttcaaaattgtccaaagaaatttctccagttttgagtgcaagtggtttggagttg
actcatcaaggaacattagtgaaggtcaacagtcttgttgtcaagggtgttgttgcgctg
ggctctgtaccatcacatgctggaaaggatttcaatctcaagattactttgccaggactt
gcggaaggatcacaaagcttaaaaattagactccttccaggtccaccggagtcgttggca
gtgacaccaggagatgctgagatcacagttgaaaacaacagctcactgcagttacaagtc
caggttcaagataaggctggaaatgtaactgttcatccaagactcaatgttgtttgcaag
ctgacaggtctaccaagtttgcctacatacagtggagactgcagctcttctggcaaggcc
accctaacaggtgctgacatctgtctaaagcatatcaccaaggaaacaaggctgaaggca
aagattgaactacaacaccataaagaagtcactccagttgagaagacaattattgtgacg
ccaagcagtaaagcagcggaactggaagtgttttacagtcatcaagtcaactggacccct
aaagtttccaaagatctcattaagcaaggagtccttccagatgtcaaggcaccattgtcc
tctgatgaatcgaagtattgtcaagttagtatgacaggtggagcaggacttgagttttct
ttcacattaagacctcatgctgatgttccaagtgtgcttaagtgttcttgccacaatcct
tatatgagactgggagagaccttagcagctgatattattctttccgttactgataaacac
ggtaataaaactggcaagttgccaagtcacgtccttcctgagttccatgtttcatctgat
ggactgagagaaagtgaggtccaactgggattcaccgctgatggaaacattgttgtcaag
aatattcagtttgaggaaggtcctctgggtcaccgagaacttgccatcaagtggaaggaa
atgatatgctatcaaaggatagaggttatttcaggaccaccagcaaagctcaagattctt
gatttggatcactctgagccaatttcagtgtttaatgacacccaaatgccacaccctctt
acggttcaactttgtgacaagctgggaaaccattcggatgaggcaaacatcaaagttgtg
ctgaactgcgatagaggactgaagttgactccaaccccagctcagcaaaagacagacagt
aagggtcaagccacatttggccatctcaccgtaagcgcagccaaaggaatgtatggaatc
agaataaaggctttacttgggagaatatctttagatgctcctactgttaacgtcagagtg
gatcctgatccatccaaagctgtgaatctttgtgtaacattcgactccaaggcaccttgt
gtggtcggcgagttattgccagccttgtcagcgcatgttgttggagaggatgacgctgtc
atgaaaccgtcgagttcaagagacatagttctaaagatctggcactcaaaagacggacca
gtatcggacaaaccgcctgccagggccacaaccttgtatccgtcaaagtcaaaatcatct
gataaagatggagagttctactttagggacctcaaggtacctgatttggcaggagactat
tgcatggtggtgcagtttggatccgaaggtcaagtcacactatcaagtaaaccgatcaca
ttcacagccaaagctgggcgtcctgtgaagcttgaacctgaatcgattcctgccacgccc
acagtgtccaacacgcaaaggaacaacagcaggctgttggtgaagacgctcaagctgcag
ctcaaggataagtttgacaatctaactggtgaaaacttgaaagggaaagtggtcattagc
gtgaactcgtcctcagaaggaatcgatgaaattcccgcactggccggcaatttgtactcc
actgaggtcccgcttgtgaagggcgtggccactgtacaaaacctcctcatacaagagaat
actgcaggaaaagatggacaggaatatctactgaacttcagcgctcagattcctgccaat
gcatcgccccatccgattccaccttttacgctagctttcctgttctacaatgatgttcgg
aagcagcagcagatggcgcagttgacaaaagagagagatcatctatttgaaaccatccgc
acttaccgccttctctttgaaacaacgcgccaacttatcaacgagatgcaagtttcagta
aacgaggcctctttgcaagaacagaagataagaggagaactcagaaagcagaacataggg
gccagcagcttggcctcggttgcttcggtgacttcactgataactgaattgtcaagaaaa
agagatgagatttccacaacaccgcggcgacaatgtctgctgcatccgggacctcgaggg
gacagcggtattcttggaaaggttgctcatttagctcaagtggtggatgatgacgtagca
cgggtgctgtcgtggcatatggcttctgatatggactgtgttgttactcttaccacagag
aaggctaaacaagtgtaccgtgattcaaaaggccagcaacaagttcttcctttagattcc
atatttagacgaagtttacccgaatggaacaggtgtgcatcgtctttgttctttgttgtt
tacgttgtgaagtacacgcattgccccacgattttaacaagatgtggagatcgcatcaga
agtaatggcaaatttggtggacttcaaaataaagcccctcagttggaaagaatgcgcggc
gcagtgttcgctgcaccgctgccgctggcatttcattcactgtcgacgcagattgaacaa
ttacaagcctacaaacaagctagcatcaaacacactcaagctaaggaagaacttacgcaa
caactacagcacggtcaaacagaagagatgaaagtaaaacaccgcgaatgcagagaggca
gaaaatcagttgcgcttgatagaggaacgcctgggtatgacaccgacgcagtacaatatg
ccacccagtccagctaccatgctactcacagaaataaacacgcctccgacaagaacatcg
gtatctcgtcggtccgcagctcgagcggctgcggcaggggcacacccaccgaag
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integrated database retrieval system
