Acropora digitifera (stony coral): 107333713
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Entry
107333713 CDS
T04352
Name
(RefSeq) probable E3 ubiquitin ligase complex SCF subunit sconB
KO
K10260
F-box and WD-40 domain protein 7
Organism
adf
Acropora digitifera (stony coral)
Pathway
adf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107333713
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
adf04131
]
107333713
04121 Ubiquitin system [BR:
adf04121
]
107333713
Membrane trafficking [BR:
adf04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
107333713
Ubiquitin system [BR:
adf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
107333713
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
Beta-prop_EML
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_DCAF12
Beta-prop_Nup120_160
F-box-like
WD40_RFWD3
Beta-prop_WDR11_2nd
Beta-prop_NOL10_N
WD40_like
Motif
Other DBs
NCBI-GeneID:
107333713
NCBI-ProteinID:
XP_015754051
LinkDB
All DBs
Position
Un
AA seq
546 aa
AA seq
DB search
MRRDLIELLLPRCNQKQITFLWTVVEPTLHRDFMYSSLNAFPRSSFSTVSTVFMMSFLVL
CQAWKLHRVQSAILHDEEDVKAWTSEAVLPIVKPPSCVSPTRQITKRSPSPDRTESRGSW
KSKSTYFGVKLPGISTVTSQSKTLPRFAASRSAPPGGATKTACQHAVRRHMQNEDKKDFP
KNCFPSSGAKTEDVPTCLLVQVSKTWRRLASRDELWQSKCKETYVGVPLSVPAVWKEIFR
ENLNLKRNWANGRCKVMDMVGHKNNVLTVCGYKNFIATGSLDRTIKVWDANTGTLIQTFT
GHTRGIWSIRFLSKSIIISGSYDKTIRLWSLRTRACARILMGHDGPVWAIERKEDILISG
SSDKTAKLWNIRQCKLLFSLVGHNGCVFCVDLDDTCKRAFSGSGDRTVRVWDVSSGICLS
SFNVGQSTDCTVTTVSYDHGYLAVGSGTMVSLWNLTTGDCVHEFSGHKNRVECVKLKFMM
VNGKKEAGLIVSSGKDGLIKYWDIEQASCIQTLRGHRDNVNSIHVDSTRIISVSFDHRVR
VWNFNT
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgtgatttgattgagttactacttccaagatgcaatcagaagcaaattacattt
ctatggacagtagttgagccaacactgcacagagacttcatgtacagttccctaaatgcc
tttccaagaagctcattcagtactgtgtctactgtatttatgatgtcctttcttgtctta
tgtcaggcctggaagctgcacagagtgcaaagtgccatcctgcatgatgaggaagatgta
aaagcgtggacatccgaagctgtcttaccaattgtcaaacctccatcctgtgtgtcaccc
acaagacaaatcacaaaacgatcaccatcacctgacagaacagaatctagaggctcctgg
aaatcaaagtccacttactttggagtcaagttgccaggaatttccaccgtgacaagtcaa
agcaaaactctgcccagattcgccgccagtcgttcagccccacccggtggggcaaccaaa
acggcttgccagcatgcagtgcggcgccacatgcaaaatgaagacaagaaagatttcccc
aagaactgctttccgagcagtggcgcgaaaacagaagacgtgccaacgtgcctattagta
caggtgagcaaaacatggcgccgtcttgcgtccagggatgaactgtggcagtcgaaatgc
aaagaaacctatgttggtgtaccgcttagcgtgccagcagtgtggaaagaaatatttcga
gaaaatctaaacttgaagcgcaactgggcaaatggccgctgcaaagttatggacatggtg
ggacacaagaacaatgtgcttactgtttgtggctacaagaacttcatcgctaccggaagc
ttggaccggacaataaaagtttgggatgcaaacacagggactttgatccaaacctttacg
ggccacacgcgtggaatttggagcattcgctttctttcaaagagtattataataagtgga
tcatacgacaaaacaattcgactttggagtctccgaacaagagcatgtgcaagaatactg
atgggtcacgatggacctgtatgggcaattgagcgtaaagaagatatccttattagcgga
tccagcgacaaaacggcaaagctatggaacattcgccaatgtaagcttcttttctcgctt
gtgggacacaatggctgtgtgttttgcgtggatttggatgacacttgcaaaagggcgttc
tctggttccggagataggactgtcagggtatgggatgtgtcctcagggatatgtctttca
tcgtttaatgtaggacaatcaacggactgcacagtcacgactgtaagctatgaccatggt
tatctggcagtcggatcggggaccatggtatccctgtggaatctgacaactggggactgt
gttcatgaattcagcggtcataagaatagagtggaatgtgttaagcttaagtttatgatg
gtgaacggaaaaaaagaagcaggcttgattgtcagttcaggaaaggatgggctcataaag
tactgggacattgaacaggcttcttgcattcagaccttaagaggacaccgagataatgtt
aacagcatccacgtcgattccactagaatcatcagcgtgtcctttgatcaccgagtccga
gtgtggaatttcaacacttga
DBGET
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