Acropora digitifera (stony coral): 107354397
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Entry
107354397 CDS
T04352
Name
(RefSeq) TNF receptor-associated factor 6-like
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
adf
Acropora digitifera (stony coral)
Pathway
adf04120
Ubiquitin mediated proteolysis
adf04140
Autophagy - animal
adf04144
Endocytosis
adf04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107354397
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107354397
04140 Autophagy - animal
107354397
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
107354397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
adf04131
]
107354397
04121 Ubiquitin system [BR:
adf04121
]
107354397
Enzymes [BR:
adf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107354397
Membrane trafficking [BR:
adf04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
107354397
Ubiquitin system [BR:
adf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
107354397
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_4
zf-RING_2
zf-C3HC4_3
U-box
TRAF3_RING
zf-RING_5
RING_XB3-XBAT31
zf-RING_11
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
107354397
NCBI-ProteinID:
XP_015776359
LinkDB
All DBs
Position
Un
AA seq
459 aa
AA seq
DB search
MVNGISPNSVITFLVREQRWPFKMNRLFCAEDSSSCFGERSTNPVSRFGRNELPLRFHEN
PRCGGYDEYFDPPLENEHECPICLLGLRDPVQTPCGHRFCRGCIWRSIRDAGSKCPVDNQ
YLDELQLTPDYFAMREMLNHAVFCKLCPWRGPLSKLEDHLKECDFVDVSCPKNCCKEFQR
RDLKKHLKNDCPNRTIPCTFCAEEVLWNSMENHFQDCPQYPLSCEKCGKENIPRNEMQDH
NEKECPTADNECPFNVVGCPFEVQQAFIFFLYVIYGMQRYCKELIDNDDQMFNRQETRAF
DFEGRVCNGSYIWRIENYRQRRQDAINGIATAVHSPAFYTSLYGYKLCLRINLNGVDRGV
GRYIALYVHMMQGDYDSILEWPFTGRITLTILDQSEGTEFRQHISETLIAKPNLLAFQRP
TAPRNYKGYGYVEFAPIEHIRDPQYIKNNTMLVRVQIDH
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggtgaatgggatttcccccaattctgtgataacatttctcgtacgcgagcaacgatgg
ccattcaagatgaatcgtttgttctgtgcagaagacagctcttcttgttttggagaaaga
agcacaaaccctgttagtcgttttgggagaaatgaactaccgttgaggtttcatgaaaat
cctcgttgtggaggttacgacgagtatttcgatcctcctttagaaaacgaacatgagtgc
cctatatgtcttttgggtcttcgcgatcccgtgcaaactccttgtggacacagattttgt
cgaggttgcatttggcgttcaataagggatgctggttccaagtgtccggttgataatcag
tatctggatgagttgcagctcacaccagactactttgccatgcgagaaatgcttaatcat
gctgttttttgcaaattgtgcccatggagaggacctctaagcaagcttgaggatcacttg
aaggagtgtgattttgttgatgtgtcttgccctaagaattgctgtaaggaattccaaagg
agagatctaaaaaagcatttgaagaatgactgtccaaataggaccatcccttgcaccttc
tgcgctgaagaggttttgtggaatagcatggagaaccatttccaagattgccctcaatat
cctttgtcttgtgagaagtgtggaaaagaaaacattccaagaaatgagatgcaagatcac
aatgagaaagagtgtccaacagcagacaacgagtgtcctttcaatgttgtgggttgtcca
tttgaggtacaacaagcatttattttttttctctatgttatatatggcatgcagcgttat
tgtaaggaattaatagataatgacgatcaaatgttcaaccgtcaagaaacgagagcgttt
gatttcgaaggccgtgtgtgcaatggttcttacatatggaggattgaaaactaccgacag
cgtcgccaggacgccatcaacggcattgcgacggccgtacacagcccagccttctatacc
agcctctatggttacaagctgtgcttgcgtatcaacttgaatggcgtggacagaggagtt
ggaagatacattgctctgtatgttcacatgatgcagggcgactatgatagcatccttgag
tggccatttaccggaaggatcacccttaccatcttggaccaatccgaaggcacagaattt
cgtcagcacatcagcgagacccttattgccaagcccaacctgttggcctttcagcggcca
acagctccgcgcaactacaagggctatggctatgtggagtttgctccgatcgagcacatc
cgcgatcctcagtacattaaaaacaataccatgctggttcgcgttcagattgatcattga
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