Acropora digitifera (stony coral): 107355817
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Entry
107355817 CDS
T04352
Name
(RefSeq) TNF receptor-associated factor 6-like
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
adf
Acropora digitifera (stony coral)
Pathway
adf04120
Ubiquitin mediated proteolysis
adf04140
Autophagy - animal
adf04144
Endocytosis
adf04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107355817
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107355817
04140 Autophagy - animal
107355817
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
107355817
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
adf04131
]
107355817
04121 Ubiquitin system [BR:
adf04121
]
107355817
Enzymes [BR:
adf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107355817
Membrane trafficking [BR:
adf04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
107355817
Ubiquitin system [BR:
adf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
107355817
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_4
zf-RING_2
zf-RING_UBOX
TRAF3_RING
Sina_ZnF
zf-TRAF_2
zf-C3HC4_3
zf-RING_5
RING_XB3-XBAT31
U-box
zf-Di19
TRAFD1-XIAF1_ZnF
zf-DNA_Pol
Motif
Other DBs
NCBI-GeneID:
107355817
NCBI-ProteinID:
XP_015777898
LinkDB
All DBs
Position
Un
AA seq
525 aa
AA seq
DB search
MSRSFGTEDSHPWFGGTSTNPVSLFGRNEPPSRFPENLRPEGYDEYFDPPLENKYECPIC
LLGLREPVQTICGHRFCRGCILRSIRDAGPKCPVDNVHLDEWQLHPDNFAKREMLNHLVF
CRLKKQYECPWKGPLSKLEDHLEGCDFVAVSCPKNCGKEFQRKDLKEHLEDDCPNRTIPC
SYCAEQILWNSMENHFEDCPQYPLSCEKCGKENIPRNEMQDHNEKECPRAELKCPFSVVG
CAFEGTRPAVDKHVQDKMFSHLTDLTKEFRALKIEQPGYQAAKSRSRRTRGGVEAQEQAI
EGLVPNDLATLFQQQQTEIDLLRGQVNEMTALVGSVERRLNESHLRVETPLQELTIRFNR
QETKALEFEGRVCNGSYIWRIENYRQRRQDAINGVATALHSPAFYTSLYGYKLCLRINLN
GVDSGVGRYIALFVHMMQGDYDSILEWPFTGRITLTILDQSEGTEFRQHISESLIAKPNL
LAFQRPTAPRNYKGYGYVEFAPIEHIRDPQYIKNNTMLVRIQIDH
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgttcgtttggtacagaagacagccatccgtggtttggaggaacaagcacaaat
cctgtcagtctttttgggagaaatgaaccaccttcaaggtttcctgaaaatcttcgccct
gaaggttacgacgagtatttcgatcctcctttagaaaacaaatatgaatgccctatctgt
cttttgggtcttcgcgaaccagtgcaaactatttgtggacatagattttgtcgaggttgc
attttgcgttcaataagggatgctggtcccaagtgtccggttgataatgtacatctggat
gagtggcagctccatccggacaactttgccaagcgggaaatgcttaatcaccttgttttt
tgccggttgaagaaacagtatgagtgcccatggaaagggcctctaagcaagcttgaggat
cacttggaggggtgtgattttgttgctgtgtcttgccctaagaattgtggtaaggaattc
caaaggaaagatctgaaagagcatttggaggatgactgtccaaataggaccatcccttgc
tcctactgcgcagaacagattttgtggaatagcatggagaatcatttcgaagattgccct
caatatcctttgtcttgtgagaagtgtggaaaagaaaacattccaagaaatgagatgcaa
gatcacaacgagaaagagtgtccaagggcggagctcaagtgtcctttcagtgttgtgggc
tgtgcatttgagggaactcgcccagcagtggataaacatgtgcaggacaagatgttcagt
catttgacagacctcacaaaggaattcagagcattgaagattgagcagccaggctatcaa
gcagcgaaaagtcgctcccgacgcaccaggggtggggtagaagcccaggagcaggctatt
gaaggtctggttcccaatgatttggcaacattgtttcaacaacagcaaacggaaatcgat
ctactgagaggccaggttaatgagatgacagccttggtggggagtgtagaacgccgcctt
aatgaatcgcacttgagggtggaaacgccgttgcaagaacttactatcaggttcaaccgt
caagaaacgaaagcgttagagttcgaaggtcgtgtgtgcaatggctcttacatctggagg
attgaaaactaccgacagcgtcgccaggatgccatcaacggcgttgcgacggccctacac
agcccagccttctataccagcctctatggttacaagctgtgcttgcgtatcaacttgaat
ggcgtggacagtggagttggaagatacattgctctgtttgttcacatgatgcagggcgat
tatgatagcatccttgagtggccatttactggaaggatcacccttaccatcttggatcaa
tccgaaggaaccgaatttcgtcagcacatcagcgagtcacttattgccaagcccaacctg
ttggcctttcagcggccaacagctccgcgcaactacaagggctatggctacgtggagttt
gctccgatcgagcacatccgcgatcctcagtacattaaaaacaataccatgctggtacgc
attcaaattgatcactga
DBGET
integrated database retrieval system
