Acropora digitifera (stony coral): 107358564
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Entry
107358564 CDS
T04352
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein 1-like
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
adf
Acropora digitifera (stony coral)
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
adf03036
]
107358564
03400 DNA repair and recombination proteins [BR:
adf03400
]
107358564
Chromosome and associated proteins [BR:
adf03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
107358564
DNA repair and recombination proteins [BR:
adf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
107358564
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMCHD1_S5
SMC_hinge
Invasin_D3
Motif
Other DBs
NCBI-GeneID:
107358564
NCBI-ProteinID:
XP_015780660
LinkDB
All DBs
Position
Un
AA seq
1894 aa
AA seq
DB search
IPADEEFVIVTTNRKEISDDKAYEELVDGNETLYILQHAAQELSAPTEERVEYIPHYDTL
VKSGMYEYYASEGQNPLRKFYGENIVLSESCLICRYNEMPSFYCGVDVTKCLPGAKNEQS
QINEISFELRMEKVLTVKHFWMITKSKDCNDIHELCISQAEFERREKMRESIYGGAILNR
RAGDHSHVPADEANVKQLVEEEVERNSFTCVVISGIKQERMVYLRTHFKQLCRQLSSVVV
LYEKGKQPKRMELRDVNDDLQTRYIRTAASVFEFRANSESGGVVEGILRYHPFLYDRETY
PSLEGEFPVVVETGEEFAEAVERDSRAPRGSRPIFECYWNGRLIPYTSIDVLDWCQPPKK
STIPLECYNRFSGCLWTNDSFHVSTNKLTFMDLEVKIRDKNTMFSRVILGQVQFIDFQGQ
IKRPDLPQKRNQSPWCVFNSIEWDGKIFKVGQLIRTQRTVPLICGTVKRFLLFGDHDGDV
FATGGEMEIVQEPVSLYGDRKFFSLAKLDRSITLASIKKFVDDEEAKLPSKLIIEWPEQN
KLEHNSKIPAGTTIGAMRVDILNGKGESVNKLPGDRKRLLVELKVIWHGTSMDKDGDKII
TNHVCQHGGKSWPYWFRKMENITHLGSHTLQLQVLLSDSSTAPSFKSLPCHRIKFTVTEA
HPNKFTVGMLETPLRVGVPFQIPLNLLDVFNNPSKLSKEISPVLSASGLELTHQGTIVKV
NSLVVKGVVALGSVPSHAGKDFNLKITLPGLAEGSQSLKIRLLPGPPESLAVTPGDAEIT
VENNSSLQLQVQVQDKAGNVTVHPRLNVVCKLTGLPSLPTYSGDCSSSGKATLTGADICL
KHITKETRLKAKIELQHHKEVTPVEKTIIVTPSSKAAELEVFYKPVDAKQGKKLEDGQEL
ACTAGQTLTGLTFKVRDEGQREVVIDSLLANRFKVNWTPKVSKDLIKQGILPDVKAPLSS
DESKYCQVSMTGGAGLEFSFTLRPHADVPSVLKCSCHNPYMRLGETLAADIILSVTDKHG
NKTGKLPSHVLPEFHVSSDLLRESEVQLGFTADGNIVVKNIQFEEGPLGHRELAIKWKEM
ICYQRIEVISGPPAKLKILDLDHSEVSKSTVCPISVFNDTQMPHPLTVQLCDKLGNHSDE
ANIKVVLNCDRGLKLTPTPAQQKTDTKGQATFGHLTVSAAKGMYGIRIKALLGRISLDAP
TVNVRVDPDPSKAVNLCVTFDSKAPCVVGELLPALSAHVVGEDDAVMKPSSSRDIVLKIW
HSKDGPVSDKPPARATTLYPSKSKSTDKDGEFYFRDLKVPDLAGDYCMVVQFGSEGQVTL
SSKPITFTAKAGRPVKLEPESIPATPTVSNTQRNNSRLLVKTLKLQLKDKFDNLTGENLK
GKVVISVNSSSDGIDEIPALAGNLYSTEVPLVKGVATVQNLLIQENTAGKDGQEYLLNFS
AQIPANASPHPIPPFTLAFLFYNDVRKQQQMAQLTKERDHLFETIRTYRLLFETTRQLIN
EMQVSVNEASLQEQKIRGELRKQNIGASSLASVASVTSLISELSRKRDEISTTPRRQCLL
HPGPRGDSGILGKVAHLAQVVDDDVARVLSWHMASDMDCVVTLTTEKAKQVYRDSKGQQQ
VLPLDSIFRRSLPEWNRSLPHVRGNQSSYSPPGNPVYARDMLLFPTEADNCKLVFGMLLG
DTLILDDLDCANKYRQEVVKYTHCPTILTRCGDRIRSNGKFGGLQNKAPQLERMRGAVFA
APLPLAFHSLSTQIEQLQAYKQASIKHTQAKEELTQQLQHGQTEEMKVKHRECREAENQL
RLIEERLGMTPTQYNMPPSPATMLLTEINTPPTRTSVSRRSAARAAAAATASPTLSSAPV
VNGTNTPSSNTSPRTRRGAPIAPEEVRSSKRTRR
NT seq
5685 nt
NT seq
+upstream
nt +downstream
nt
attccagcggacgaagagtttgttattgttaccaccaatcgtaaagagatctctgatgac
aaggcgtatgaagaacttgtggatggaaatgaaacactgtacattttgcaacatgctgcc
caagaacttagtgcacccactgaagaaagagttgaatacattccacactatgacaccctg
gtcaaaagtggaatgtatgaatattatgccagtgaaggacaaaatcccttgcgtaagttt
tatggtgaaaatattgtattatctgagagctgtttaatatgcagatataatgagatgcct
tccttttactgtggtgtagatgtcacaaagtgtctccctggtgcaaagaatgagcaaagt
caaattaatgaaatttcatttgaactgcgaatggaaaaagttttaacagtgaaacacttt
tggatgatcacgaagtccaaggattgtaatgacatccatgagctgtgcatttctcaagct
gaatttgagcgcagagagaaaatgcgagagtccatttatggaggtgcaattctgaataga
agggcaggagatcacagccatgtgcctgcagacgaagcaaatgtcaaacaacttgttgag
gaggaggtcgagaggaacagtttcacttgtgtggtaatatcagggatcaagcaggaaagg
atggtgtacctgaggactcatttcaagcagttatgcaggcagctgtcgtcagttgttgtg
ctgtatgaaaaaggtaagcagcccaagaggatggagctgcgagatgttaatgatgatttg
caaacacgttacatcaggacagctgcttctgtgtttgagttccgtgcaaattcagagtca
ggcggtgttgtggaaggtatcctgcgttaccatccatttctttatgacagagaaacatat
ccatctcttgagggagaatttccagtagttgttgaaacaggtgaagaatttgccgaggca
gtggaaagagacagccgagcacctagaggaagtcgtccgatctttgagtgttattggaat
ggacgactcatcccatacacttctatagatgtacttgactggtgccaacctcctaagaag
tcaaccatcccactggagtgttataacagattctctggatgtctttggacaaatgatagt
tttcatgtgagcacaaacaagctgacgtttatggatttggaggtgaaaatcagagacaag
aacaccatgttcagcagggtcatcctgggacaggtccagttcatagattttcaaggccag
attaaacgcccagaccttccacagaagcgaaaccaaagtccttggtgtgtcttcaactcc
attgagtgggatggaaagatctttaaagttggacaactgataaggactcaaaggacagtt
ccattgatctgcggaactgtaaagagatttctcctttttggtgaccatgatggagatgtg
tttgcaacaggtggcgagatggagattgttcaggagcctgtttcattatatggggacaga
aagttcttttccttggctaagttggaccgctcaataactcttgcttcaattaagaaattt
gtggatgatgaagaagcaaagctgcccagtaagttgatcatagaatggccagagcaaaac
aagctggaacataactcaaaaattcctgctggaaccaccataggggccatgagggttgat
attctaaatggaaaaggtgaatctgtcaacaaacttcctggtgacaggaaaaggttattg
gtggaactgaaggtcatttggcatggtacttctatggacaaagatggagacaaaatcatt
actaatcatgtctgtcaacatggtggaaaaagttggccttattggttcagaaaaatggag
aacatcactcaccttggttctcacactctccagctgcaagttcttctaagtgacagttca
acagcaccatctttcaagagcctgccctgtcatcgtatcaagttcaccgtcacagaggct
caccccaataaattcactgttggaatgttggaaaccccactaagagttggagtaccattt
cagattccacttaaccttcttgatgtgttcaacaatccttcaaaattgtccaaagaaatt
tctccagttttgagtgcaagtggtttggagttgactcatcaaggaacaatagtgaaagtc
aacagtcttgttgtcaagggtgttgttgctctgggctcagtgccatcacatgctggaaag
gatttcaatctcaagattactttgccaggacttgcggaaggatcacaaagcttaaaaatt
agactccttccaggtccaccggagtcgttggcagtgacaccaggagatgctgagatcaca
gttgaaaacaacagctcactgcagttacaagtccaggttcaggataaggctggaaatgta
actgttcatccaagactaaatgttgtttgcaagctgacaggtctaccaagtttgcctaca
tacagtggagactgcagctcttctggcaaagccaccctaacaggtgctgacatctgtcta
aagcatatcaccaaggaaacaaggctgaaggcaaagattgaactgcagcaccataaagaa
gtcactccagttgagaagacaattattgtgacgccaagcagtaaagcagcggaactggaa
gtgttttacaaaccagtggatgcaaaacaaggaaaaaagcttgaggatggacaggagtta
gcctgcacagcagggcaaacactcacaggattgactttcaaagttcgcgatgaaggacag
agagaagttgtgatagacagcttgttggccaatcgattcaaggtcaactggacccctaaa
gtttccaaagatctcattaagcaaggaatccttcccgatgtcaaggcaccattgtcctct
gatgaatcgaagtattgtcaagttagtatgacaggtggagcaggacttgagttttctttc
acattaagacctcatgctgatgttccaagtgtgcttaagtgttcttgccacaatccttat
atgagactgggagagaccttagcagctgatattattctttccgtcactgataaacacggc
aataaaactggcaagttgccaagtcacgtccttcctgaattccatgtttcatctgattta
ctgagagaaagtgaggtccaactgggattcaccgctgatggaaacattgttgtcaagaat
attcagtttgaggaaggtcctctgggtcaccgagaacttgccatcaagtggaaggaaatg
atatgctatcaaaggatagaggttatttcaggaccaccagcaaagctcaagattcttgat
ttggatcactctgaggtgagtaaaagtactgtttgtccaatctcagtgtttaatgacacc
caaatgccacaccctcttacggttcaactttgtgacaagctgggaaaccattcggatgag
gctaacatcaaagttgtactgaactgcgatagaggactgaagttgactccaaccccagct
cagcaaaagacagacactaagggtcaagccacatttggccatctcaccgtaagcgcagcc
aaaggaatgtatggaatcagaataaaggctttacttgggagaatatctttagatgctcct
actgttaacgtcagagtggatcctgatccatccaaagctgtgaatctttgtgtaacattc
gactccaaggcaccctgtgtggtcggcgagttattgccagccttgtcagcgcatgttgtt
ggagaggatgacgctgtcatgaaaccgtcgagttcaagagacatagttctaaagatctgg
cactcaaaagacggaccagtatcggacaaaccgcctgccagggccacaaccttgtatccg
tcaaagtcaaaatcaactgataaagatggagagttctactttagggacctcaaggtacct
gatttggcaggagactattgcatggtggtgcagtttggatccgaaggtcaagtcacgcta
tcaagtaaaccgatcacattcacagccaaagctggtcgtcctgtgaagcttgaacctgaa
tcgattcctgccacgcccacagtgtccaacacgcaaaggaacaacagtaggctgttggtg
aagacactcaagctgcaactcaaggataagtttgacaatctaactggtgaaaacttgaaa
gggaaagtggtcattagcgtgaactcgtcctcagacggaatcgatgaaattcccgcactg
gccggcaatttgtactccactgaggtcccccttgtgaagggcgtggccactgtacaaaac
ctcctcatacaagagaatactgcaggaaaagatggacaggaatatctactgaacttcagc
gctcagattcctgccaatgcatcgccccatccgattccaccattcaccctagctttcctg
ttctacaatgatgttcggaagcagcagcagatggcgcagttgacaaaagagagagatcat
ctatttgaaaccatccgcacttaccggcttctctttgaaacaacgcgccaacttatcaac
gagatgcaagtttcagtaaacgaggcctctttacaagaacagaagataagaggagaactc
agaaagcagaacataggggccagcagcttggcctcggttgcttctgtgacgtcactgata
agtgaattgtcaagaaaaagggacgagatttccacgacaccgcggagacaatgtttgctg
catccgggaccccgaggggacagcggtattcttggaaaggttgctcatttagctcaagtg
gtggatgatgacgtagcacgggtgttgtcgtggcatatggcttctgatatggactgtgtt
gttactcttaccacagagaaggctaaacaagtgtaccgtgattcaaaaggccagcaacaa
gttcttcctttagattccatatttagacgaagtttacccgaatggaacagatccttgcct
catgtacgtggtaatcaaagtagctactccccacctggtaaccctgtgtacgcaagagat
atgctgctctttcctacagaagctgacaactgcaagctagtgtttggcatgttgttgggg
gatacattgatacttgatgacttggattgtgcaaataaataccgacaagaggttgtgaag
tacacccattgccccacgattttaacaagatgtggagatcgcatcagaagtaatggcaaa
tttggtggacttcaaaataaagcccctcagttggaaagaatgcgcggcgcagtgttcgct
gcgccgctgccgctggcatttcattcactgtcgacgcagattgaacaattacaagcctac
aaacaagctagcatcaaacacactcaagctaaggaagaacttacgcaacaactacagcac
ggtcaaacagaagagatgaaagtaaaacaccgcgaatgcagagaggcagaaaatcagttg
cgcttgatagaggaacgcctgggtatgacaccgacgcagtacaatatgccacccagtcca
gctaccatgctactcacagaaataaacacgcctccgacaagaacatcggtatctcgtcgg
tccgcagctcgagcggctgcggcagcgacagcctcaccgacgttgtcatcggcgcctgtc
gtaaacggcacgaacaccccttcgtcaaatacttctccacgaacaagacgaggtgctccg
atcgctcccgaagaagtccggtcaagtaaacgtactcggagatga
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integrated database retrieval system
