Azospirillum doebereinerae: ACIU1J_20545
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Entry
ACIU1J_20545 CDS
T10877
Symbol
nth
Name
(GenBank) endonuclease III domain-containing protein
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
adj Azospirillum doebereinerae
Pathway
adj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
adj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACIU1J_20545 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
adj03400
]
ACIU1J_20545 (nth)
Enzymes [BR:
adj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ACIU1J_20545 (nth)
DNA repair and recombination proteins [BR:
adj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ACIU1J_20545 (nth)
Prokaryotic type
ACIU1J_20545 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
XKH37737
LinkDB
All DBs
Position
contig_3:244754..245509
Genome browser
AA seq
251 aa
AA seq
DB search
MTDPAALRAKALEIHRLLCTVHGCPVPYFHSLDPLSELVSSLLSHRTRNAASGAAFKALR
RRWPGGPDAVERAADWAAVRDAPTAEVEAVIAGVTWPEQKAPRIQAILHRITERTGGLSL
DVLNELSVPEARAWLEELPGVGPKTSAAVLSFSTLRRAALPVDSHHHRVAVRTGLIPASL
AVGPSHAVLAAQLPPEWDAQQVYDNHEVLMLHGQRCCYYRDPACDRCVLLKLCPTGQALH
PVREEEERARA
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccccgccgcactgcgcgccaaggcgctcgaaatccaccggctgctgtgcacc
gtccacggttgcccggtgccctatttccacagcctggatccgctcagcgagctggtctcc
tcgctgctgtcgcaccgcacgcgcaacgcggcctccggcgccgcgttcaaggcgctgcgg
cgacgctggccgggcgggccggacgccgtcgaacgggcggcggattgggcggcggtccgc
gacgcgcccacggcggaggtcgaagcggtcatcgccggggtaacgtggccggagcagaag
gcgccgcgcatccaggccatcctgcaccggatcacggagcgcaccggcggcctgtcgctc
gacgtgctgaacgagctgtccgtgcccgaggcccgcgcgtggctggaggagttgccgggc
gtcggcccgaagaccagcgccgccgtgctgagcttctccacgctccgccgcgccgcattg
ccggtggacagccaccaccaccgcgtggcggtgcgaaccggcttgattccggcctcgctg
gcggtcggaccgtcccacgccgtgctggccgcgcagttgccgccggagtgggacgcgcag
caggtctacgacaaccacgaggtcctgatgctgcacgggcagcgctgctgctattaccgc
gacccggcctgcgaccgctgcgtgctgctgaagctgtgcccgacggggcaggcgcttcat
ccggtccgggaggaggaggaaagggcgcgggcataa
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