KEGG   Auricularia subglabra: AURDEDRAFT_170030
Entry
AURDEDRAFT_170030 CDS       T03129                                 
Name
(GenBank) hypothetical protein
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
adl  Auricularia subglabra
Pathway
adl03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:adl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    AURDEDRAFT_170030
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:adl03400]
    AURDEDRAFT_170030
Enzymes [BR:adl01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     AURDEDRAFT_170030
DNA repair and recombination proteins [BR:adl03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     AURDEDRAFT_170030
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N RNA_ligase Amanitin
Other DBs
NCBI-ProteinID: EJD40837
JGI: 170030
UniProt: J0WWQ2
LinkDB
AA seq 978 aa
MDVPFTHFADLVESLSRIPPVRTAQSGGTRPSDKAHTLLRRWILSVQDHKDAASGLAPGT
ALAFFRLLFPDDDRRRYGMQETALAEALVDVLGISAAGRGKRLVHWGEWSRTDPKVGCLG
QELRQAYELSYSKREGEVPSMREVDAMLTELAALSPFSQVAQTTTETPRRTRKAILRSLY
KRLSPFEAAVVTQLILRDLRPIIYPGTSTLHGTAALMDYNSRAYHILTKWEAMKVWHEDL
PRAYRARGSWEEACDAWDKNQLSSACKPRIGVPVEIPKTVKGTSCENVAKIYSRCSAIYA
ETKYDGERMQIHIDFSLPSHQQIRIFSKSKRDSTADRDATLSLIRDALHGSGTRKAILEA
EMVAYSDELGHIDEFWRIRSLIESTAHGVRRRPHPRPTELEGVTQDSMVSNASASGTRHL
ALVFFDVLLHNDECLLDTAYESRRACLERIIRCSKGFVMLVERVKIDMKDGKAVESIEHV
FARRCAEFEEGLVFKAVGGGYNDPHSPWVKLKKDYIAGLGDAVDLVIVGATWDKDRGREL
GVGPRTFTTFWVAAPHGYEGAQPRVDVLFTASYGLSRAALEELNFIITAQDCIPWRKENP
DQTLASLPYVCEFGLMVARPQVLLRVPFLAEVMGAGFTKARGGNNYELRFPRILKVHRPF
DRRWTEGVNIEEYQGLARCAVGRERKGKHVDDDVHAMWNIQSSPRVRSELKRKQREDSLL
DKMDSLNGRKRRKTDGGEMVKPPDTSSSTSGAPPLTETWPLVPFTPAAVVSDALPKMDLK
LEPPATPPATPPAPMSLSRVPLRESNHESTHAAHSKSRNSTSSFATSKPSAFPPPVATTT
KMLGAGLHDYTQIKEYLAASFVCILQPRGSAVAKACLTSRPRSQQLIPEGRLFHSVQALL
FAIGWQGGENGLRHSDRGIVFADSKDEVLLRDLVAVLAQLWTPQKKACWVVDVSVLNWES
LPNFTLEIEQRILWRPPS
NT seq 2937 nt   +upstreamnt  +downstreamnt
atggacgtgccgtttacccattttgccgatttggttgagagcctgtctcggattccaccc
gttcggacagcgcagagcggcgggacgcgtccttcagacaaggcgcacactctattgaga
cgatggatactgtcagtgcaggatcacaaggatgctgcatctggcctggcacctggcacc
gcgctggcgttctttcgtctgctattccccgacgacgaccgccggcgctatgggatgcag
gaaactgccctggccgaagcgctggttgacgtcctgggcatatctgctgcagggcgtggc
aagcgcctggtacactggggcgaatggtcgcgcaccgatcccaaggttgggtgtctcgga
caggagctacggcaggcttacgagctctcatactcgaaacgcgaaggagaagttcccagc
atgcgcgaggtggacgccatgctcacagagctcgctgctttatcgccattctcgcaagtc
gcacagacgaccacggaaaccccgcgcaggactcgaaaggcgatccttcgctccctctac
aagaggttgtcgccattcgaagctgcggtcgtcacgcagctcatcctacgcgacctcagg
cccattatctatccagggacctcgaccctccatggcacggctgccctcatggactataac
tctcgcgcttatcacatcctaaccaaatgggaagccatgaaggtctggcatgaagatctc
cctcgcgcgtatcgtgctcgagggtcatgggaggaggcatgcgacgcttgggacaagaat
caactttcttccgcctgcaaaccccgcattggggttcccgtcgaaattcccaaaacggtc
aaggggacgtcgtgtgagaacgtggccaagatttactcgcgctgtagcgcaatctacgcc
gaaacaaaatacgatggcgagcgcatgcagatccatatagacttctctctgccctcgcac
cagcaaattcgcatattcagcaagtcgaagcgtgattcgactgcagaccgcgacgcgacg
ctctctctcatccgcgacgcgctccacggcagcggcacccgaaaagcgatcctagaagca
gagatggttgcgtactcggacgagctcggacacatcgatgaattctggcgcatacgcagc
ctcatcgagtcgaccgcccacggcgtgcgaaggcgccctcacccgcgcccgacggagctg
gaaggcgtgacgcaggactccatggtctccaacgcgtccgccagcgggactcggcatctt
gccctcgtgttctttgacgtgctcttgcacaacgacgagtgtttgctggacactgcatat
gagagccggcgcgcgtgcctcgagcgtatcatccggtgctcgaagggcttcgttatgctc
gttgagcgggtgaaaatcgacatgaaggatgggaaggctgtcgaaagcatcgaacatgtc
ttcgcacgtcgctgtgccgagttcgaggagggtttggttttcaaggctgttggcggcgga
tacaatgacccgcattcgccctgggtcaaactgaagaaagactatattgcgggcctcggc
gatgccgtcgaccttgtgatcgttggagcaacgtgggacaaggaccgtggacgcgagcta
ggcgtcggccccaggacgttcaccaccttctgggtggcagctcctcacggttacgaaggc
gcacaaccccgagtcgatgtgctcttcaccgcatcgtacggtttgagcagagccgccctc
gaagaactgaacttcatcatcaccgctcaggactgtattccgtggaggaaggagaacccc
gaccaaaccctggcgtcgttgccatatgtctgcgagttcggtttaatggtcgcgcggcca
caagtgctgttgcgcgtaccatttctcgctgaggtcatgggcgctggcttcactaaggct
cgcggaggaaacaattacgagctacgattcccgaggatcctaaaggtacatcgacccttc
gacaggcgctggaccgaaggcgtgaacatcgaagagtaccaaggtttggcgcgatgcgcc
gttggccgcgaacgcaagggcaagcacgtagacgacgacgttcacgctatgtggaatatc
cagtcgtcgccgcgagttcgctccgagctcaagcgcaaacaacgcgaagacagcctgctc
gacaagatggacagcctgaacggacgcaagcgcaggaagacagatgggggtgaaatggtc
aagccgcctgatacgtcgtcgtcgacaagcggcgctccgcctctcacggagacgtggcct
ctggtaccgtttactcccgccgcggtcgtttcagacgcacttcctaagatggacctgaag
ctcgaaccacctgcaacgccaccagccacaccgccggcgccaatgtcactttctcgagtg
cccttgcgcgagtcaaaccatgaatcgacgcatgcagcccattccaaatctcgcaactcc
acgtcctcgttcgctacatcgaagccttctgccttcccgccccccgttgccacaaccaca
aagatgctgggagctgggctgcacgattacacgcagatcaaggagtaccttgcggcatcc
ttcgtttgcatactacaacctcgcggatcggccgtcgcaaaggcctgtcttacgagtcgg
ccaaggtcacaacagttaatcccagaaggccgcctctttcattccgttcaggctctgctt
tttgcaatcggatggcagggcggagaaaacggtttgcgacactcggatcgcggaatcgtc
ttcgcggactcgaaggacgaggtgctcctccgcgatctcgtcgccgtcttggcccagctg
tggacgccgcagaagaaggcctgctgggtcgtcgacgtctcggtgttgaactgggagtcc
ttgcccaacttcacgctcgagatcgagcagcgcatcctctggcgcccgcctagctga

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