KEGG   Auricularia subglabra: AURDEDRAFT_83800
Entry
AURDEDRAFT_83800  CDS       T03129                                 
Name
(GenBank) Sm-like ribonucleo protein
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
adl  Auricularia subglabra
Pathway
adl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:adl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    AURDEDRAFT_83800
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:adl03019]
    AURDEDRAFT_83800
   03041 Spliceosome [BR:adl03041]
    AURDEDRAFT_83800
   03032 DNA replication proteins [BR:adl03032]
    AURDEDRAFT_83800
Messenger RNA biogenesis [BR:adl03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     AURDEDRAFT_83800
Spliceosome [BR:adl03041]
 Complex A
  U1 snRNP components
   Sm proteins
    AURDEDRAFT_83800
  U2 snRNP components
    AURDEDRAFT_83800
 Complex B
  U1 snRNP components
    AURDEDRAFT_83800
  U4/U6.U5 tri-snRNP components
    AURDEDRAFT_83800
 Complex C
  U2 snRNP components
    AURDEDRAFT_83800
DNA replication proteins [BR:adl03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     AURDEDRAFT_83800
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-ProteinID: EJD50740
JGI: 83800
LinkDB
AA seq 183 aa
MPPPKSKGGKMLALINWRLKVTLNDGRALVGHMLAFDRHMNLVLADCEEFRRVRPKKKAG
ESSEGPAPEQEIKRTLGLVILRGETVVSLSVEGPPPVQDEEKKNAMFPGPGRGMPAGRGI
GLAGMVPPALAGRPMPYGGPPPGMPGMPPPGFRPPGPPGFPGAPPFGAPPGFPGGPPPGF
GGQ
NT seq 552 nt   +upstreamnt  +downstreamnt
atgcctcctccaaaatccaagggcgggaagatgctcgccttgatcaactggcggctcaag
gtcacgctgaacgatggccgcgcgcttgtcgggcacatgctggcgttcgacagacacatg
aacctcgtgctcgccgactgcgaggagttccgacgcgtccgccccaagaagaaggccggc
gagtcgtccgagggccccgcgcccgagcaggagatcaagcggacactcggtctcgtcatt
ctgcgcggcgaaaccgtcgtcagcttgagcgtcgagggcccaccgcccgtgcaggatgag
gagaagaagaatgcgatgttcccgggtcctggtcgcggcatgcctgctgggcgtggaatt
ggtcttgcaggaatggtccctccagcgctcgccggccgacccatgccctacggcggccct
ccgcctggcatgcccggcatgcctccgccaggcttccgccctcctggcccacccggcttc
ccaggtgcaccgccgttcggtgcgccgccaggcttcccgggcggccctccgcctggtttt
ggtggccagtag

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