Arachis duranensis: 107492071
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Entry
107492071 CDS
T04300
Name
(RefSeq) 5'-3' exoribonuclease 4
KO
K20553
5'-3' exoribonuclease 4 [EC:3.1.13.-]
Organism
adu
Arachis duranensis
Pathway
adu04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
107492071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adu03019
]
107492071
Messenger RNA biogenesis [BR:
adu03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
107492071
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
107492071
NCBI-ProteinID:
XP_015968525
UniProt:
A0A6P4DHQ4
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All DBs
Position
6:complement(4137298..4146317)
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AA seq
956 aa
AA seq
DB search
MGVPAFYRWLADRYPLSISDVVEEEVPATSEGGAPPFFVDISKPNPNGMEFDNMYLDMNG
IIHPCFHPDGKPAPATYNDVFKSIFDYIDHLVSLVRPRKLLYLAIDGVAPRAKMNQQRSR
RFRAAKDAAEAEAEEERLRKEFEGELELLPSKDKPETSDSNVITPGTPFMAVLSLALQYY
VQTRLNYNPGWRNIKVILSDSNVPGEGEHKIMEYIRSQRNLPGFNPNTRHCLYGLDADLI
MLSLATHEVHFSILREVITFPGQQEKCYQCGQVGHLAADCRGKPGEKPEDWNPVDDTPIH
KKKYQFLNIWVLREYLQYELDIPNPPFAIDFERIVDDFVFLCFFVGNDFLPHMPTLEIRE
GALNLLMHIYRKEFTAIGGYLTDAGEVFLDRVEHFIQSLAVHEDQIFQKRVRIQQASEIN
EEMRARARGEMPEEPRASVVDKVKLGEPGYKERYYAEKFGVSDPEEIEKTRKDTVLKYVE
GLCWVCRYYYQGVCSWQWYYPYHYAPFASDLKDLNDLEITFFMGEPFKPFDQLMGTLPAS
SSSALPEKYRDLMSDPTSPIFEFYPADFEIDMNGKKFAWQGVAKLPFIDEKKLLDATRKL
EGTLTGEEQLRNSKMLDLLYVGFSHDLAPHIILYYQYNSNLPFLERPAWPIDPNASGGMN
GFLWLSDRNVFRSSVLSPIEGLQDIDHNQVLNITYLNPRKHSHIPEPPAGVVMPKKILKA
IDIKPFPVLWHEDNGGRRQFGRERPHVPGAIAGPQLGEAAHRLVKNSLNIKSNNTSHGFS
EQLPGYNTMNRLRPAGPSGSGKYYGEDTSGYYGHYPNQHGMINRPRYPISSNGGPSDRQN
FRMQHHEHQFHNVRTGFSALTMEDGMRPRLSAPKTPAMMFLRPPNTGSANNMQQQFVQNI
GPPIPPPKWITKGPDTNGVYARHQEVGFGGSYDKQMKKVYQIRTRQTQDMPEYGSR
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcccagcgttttatcggtggctcgctgaccggtatcccctctccatctccgac
gtcgttgaggaagaggtcccggccacctccgaaggcggcgcacctccgttctttgttgat
atctcaaaacctaatcccaatggcatggagttcgacaacatgtacctcgacatgaacggc
atcatccatccttgttttcaccccgatggaaagccagcacctgctacctataacgatgtg
ttcaaatcaatatttgattacatcgaccatctcgtttcgttggttcgtccaaggaagctg
ctctatcttgcaattgatggagttgcacctagagccaaaatgaatcagcaacgttctcgg
cgcttccgagctgcaaaagatgcagctgaggctgaagctgaagaggaaaggctgaggaaa
gaatttgagggtgagttggaacttttgccttctaaagacaagcctgagacttccgactca
aatgtcatcacccctggcactccgtttatggcggtgctgtcgctggctcttcagtattat
gtacaaactagattgaactacaaccctggctggcggaatataaaggttatactttctgac
tcaaatgtccctggcgaaggagaacataaaataatggaatatatccgatcacaacgtaac
cttcccggttttaacccaaatactcggcattgtttgtatgggttggatgctgatttgatt
atgctttcgttggctacacatgaggttcacttctcgatattgagggaggtaattactttc
cccggacaacaagagaagtgttatcagtgtggtcaagttggccatcttgcagctgactgt
cgtggtaaaccaggtgaaaaacctgaggactggaatcctgttgatgatacccccattcac
aagaagaaatatcagtttcttaacatttgggtactgcgggaatatctgcaatatgaattg
gacatacccaatcctcctttcgcgattgactttgagcgaatagtggatgattttgtattc
ctatgtttctttgttggcaatgattttcttccacatatgccaacattagagattcgggag
ggtgctttgaatttattgatgcatatttatagaaaggaattcactgcgattggtggttat
cttactgatgcgggtgaggttttcttagacagagtggaacattttatccaatctcttgct
gttcacgaagatcaaatatttcagaaacgagttcgaattcagcaggcttcagaaataaat
gaagagatgagagctagggcaagaggagaaatgcctgaagagccacgtgcctctgttgtg
gataaggttaagttaggggaacctggatacaaggaaaggtattatgctgaaaaatttggt
gtatcagatcctgaggagattgagaaaaccaggaaagatacggtcttgaaatacgtggaa
ggcctttgttgggtttgtcgatattactatcaaggtgtctgttcttggcaatggtactac
ccataccattatgctccttttgcttcagatcttaaagatctaaatgatctggaaataact
tttttcatgggggaaccatttaaaccttttgatcagctcatggggaccctaccagcttca
agctcaagtgctttgcctgaaaagtatagggatttgatgagtgatccaacatcacctatt
tttgaattttatcctgctgattttgagattgatatgaatggcaaaaaatttgcttggcag
ggtgttgccaagttgccattcattgatgagaagaaattgcttgatgccacaaggaagctt
gaagggacattaacgggggaggaacaactccgtaatagcaagatgcttgatttgctttat
gtcggcttttcccatgatttggctccacatatcatactgtactaccaatataatagtaat
ctaccttttcttgaaagacctgcttggccaattgacccaaatgctagtggtggaatgaat
gggtttctctggttatccgacagaaatgtgttcagatccagtgtattatcccccattgaa
ggattgcaggatattgatcataaccaagttttgaatattacatatcttaatcctcgtaaa
catagtcatatcccagaacctccagctggtgtagtaatgcccaaaaagatattaaaagcc
attgatattaaaccttttcctgtgctgtggcacgaagataatggtggtcgacgacagttt
ggtagagaaaggccacacgtacctggagcaatagctggccctcaactaggagaagcagca
catcgtcttgtcaagaactcccttaatataaaatcaaacaatacgtctcatggattttca
gagcaacttccagggtataatacaatgaacaggctcagaccagctgggccctctggttct
ggaaaatattatggtgaggatacaagtggttattatggacactatcctaatcagcatggc
atgataaataggccgagatatccaatctcttctaatgggggaccaagtgacagacagaac
tttaggatgcagcatcatgaacatcagttccacaatgtgagaacagggttttctgctttg
acaatggaggatggcatgagacctcggttatccgctccaaagacgcctgcgatgatgttt
ttgaggcctccaaacacgggatcagcaaacaatatgcaacaacaatttgtgcagaacata
ggtcctccgataccacctccaaagtggattaccaaaggaccagatacaaatggagtatat
gccagacatcaagaagttgggtttgggggatcttatgacaaacagatgaagaaggtttac
caaatcagaacacgtcaaacccaggatatgccagagtatgggagcagatag
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