Acromyrmex echinatior (Panamanian leafcutter ant): 105151243
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Entry
105151243 CDS
T03917
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105151243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aec03041
]
105151243
Spliceosome [BR:
aec03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
105151243
Complex C
U5 SnRNP specific factors
105151243
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
Roc
Ras
MMR_HSR1
ABC_tran
Motif
Other DBs
NCBI-GeneID:
105151243
NCBI-ProteinID:
XP_011063136
UniProt:
F4X0B9
LinkDB
All DBs
Position
Unknown
AA seq
981 aa
AA seq
DB search
MDADLYDEFGNYIGPDLASESEDENEYGNVGDDTEDRERSDEEMEEDKDESREQVEQGSS
MAVVLHEDKRYYPSALEVYGPEVETLVQEEDAQPLDKPLIAPTRKAKFQIKQQQLPETTY
SIEFLADMMDAPHLIRNVVLLGHLHHGKTTLVDCLVQQTHPYLHSITDEKPLRYTDTLFT
EQQRGVSTKATPVTLLLQDVKSKSYLLNIFDTSGHVNFSDEATAAIRLSDGAILIVDAAE
GVMLNTERLLKHAIQEKLALTVCINKIDRLVLELKLPPLDAYYKLRHIIEEINGLIALYS
SDTENSGFVSPAVGNVCFASSEYNVCFTLKSFAALYARNYPGLNANEFAKRLWGDIYFNP
KTRKFTKKPPHNTAQRSFIEFILEPLYKIFAQVVGDVDTTLPDVLDELGIRLTSEEMKMN
IRPLLRLVCTRFLGDMCGLVDMCVTHVPSPQAHAPTKVQHVYTGPIDSPLAQDMINCDPD
GRLMIHSTKMYPTEDCTLFVVLGRVMSGTLEAGQRVRVLGEAYSRTDEEDSRVLTVGRLW
ISEARYSIELSRVPAGNWVLIEGIDRPIVKTSTITDLNNSEELHIFRPLKFNTQSVIKIA
VEPVNPSELPKMLDGLRKVNKSYPLLGTRVEESGEHVVLGTGELYLDCAMHDLRRMYSEI
DIKVADPVVAFAETVVETSSLKCFAETPNKRNKLTMIAEPLERGLAEDIEAEHVRITWNK
KRLGEFFQTKYDWDLLAARSIWAFGPDSTGPNILVDDTLPSEVDKTLLNSARDAIIQGFQ
WGTREGPLCEEPIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVAYSAFLMATPRLMEPY
LFVEVQAPADCVSAVYTVLAKRRGHVTQDAPVPGSPLYIIKAFIPAIDSFGFETDLRTHT
QGQAFCQSVFHHWQIVPGDPLDKSINMRPLEPQPATHLAREFMLKTRRRKGLSEDVSINK
FFDDPMLLELARQDVLLNYPL
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atggatgcggatttatatgatgaatttggaaattatattggtcctgatttggcatcagaa
agtgaagatgaaaatgaatatggtaatgttggtgatgacaccgaggatagagaacgatcg
gatgaagaaatggaagaagacaaggatgaatcacgagaacaagtggaacaaggatcttct
atggcagttgtattgcatgaagataaacgatattatcctagtgcattagaagtgtatgga
cctgaggtagaaacgcttgtacaagaggaagatgcccaaccactagataaaccattaata
gcacctactagaaaagcaaagtttcaaataaaacaacaacagctgcctgaaactacatat
agcattgaatttttagcagatatgatggatgcaccacatcttattagaaatgtagttttg
ctgggacatcttcatcatggcaaaactactttggtcgattgtttggtacaacaaacgcat
ccttatttacacagtataaccgacgagaaaccactgagatatacggatacattatttacc
gagcaacaaagaggtgtctccacaaaagctactcctgtcactctcttgttacaagatgtt
aaatctaaatcatatcttttaaacatatttgatacatccggccatgtgaatttttctgac
gaagcaacagctgcaatcagactgtccgatggtgcgatattaattgttgacgcagcagaa
ggagtgatgctgaacactgaacgcctgctgaagcatgcaattcaagaaaagcttgctttg
acagtttgcataaataagatagatcgtttggtattggaattaaaactaccacccttggat
gcttactacaaactgcggcatattattgaagaaatcaacggattaatagcactatattct
tcggacactgaaaattctggctttgtgtcacctgctgtaggaaatgtttgttttgctagt
tctgaatataatgtatgcttcactttgaaatcgtttgccgcactctatgctaggaactat
cctggactcaatgccaacgaatttgccaaacggctctggggtgatatttattttaatcct
aagacacggaagtttaccaagaaaccacctcataatactgcacagcgaagttttattgag
tttatcttggaacctctgtataagatatttgcgcaagtcgtcggtgatgtagatacaaca
ttacctgatgttctggacgaacttggtatacgattaacatccgaggaaatgaagatgaat
atacgaccgttactgagacttgtttgtacacgattcttaggcgatatgtgtggattagtg
gacatgtgtgtcactcatgtacctagcccacaagcacatgcacccactaaagtacagcat
gtctatactggtccaatagattcgcctcttgcgcaggatatgattaattgtgatcctgac
gggagattgatgatccatagtacaaaaatgtatccaactgaagattgcaccttatttgta
gttcttggtagagtaatgtctggtacattggaagcaggacaacgtgttcgcgtattaggt
gaagcgtattcacgcacagacgaagaagattcgcgtgttctgacagtaggcagattgtgg
attagcgaggcgcgttactcaattgagttaagtcgcgtgcctgcaggtaattgggttctc
atagaaggtattgatcggccgatcgtaaaaactagcaccatcacggatcttaacaactct
gaagagttgcatatctttcgaccgctcaagtttaatacacaaagcgttatcaaaattgcc
gtcgaaccggtgaatccatccgagttaccaaagatgttggatggtttgcgaaaagtaaat
aagagctatccgctgctgggcacgcgagtggaggaaagtggcgagcacgttgtgctagga
actggtgaactttatctcgactgtgcaatgcatgatctacgtcgtatgtattctgagatt
gatataaaggtagccgatccggtagttgccttcgcagaaaccgtcgtagaaaccagttct
ctcaaatgctttgctgaaacaccaaataaacgaaataaattgacgatgatagcggaaccg
cttgaaaggggtcttgctgaagacatagaagccgaacatgtccgtattacatggaacaaa
aagagactaggagaatttttccaaactaaatacgattgggatttattagcagcgcgaagt
atatgggcatttggtcctgactctacaggacctaacattttggtggatgacacattgcct
tctgaagtagataaaacattattgaacagtgcccgcgatgctatcattcaaggcttccaa
tggggaactcgtgaaggtccgttatgtgaagaacctattcggaatgtgaaattcaaaatc
cttgatgcagtcattgcgcaagagccattgcatagaggaggtggtcaaatcattcctact
gctcgacgtgttgcatattcagcttttctcatggcgactccacgattgatggaaccatat
ctgtttgtcgaggtacaagcacccgcagattgcgtgtccgctgtttatactgttctggcg
aaacggcgaggtcacgtaacgcaagatgccccagtcccaggcagtcctttgtatataatc
aaagccttcataccagcgatcgacagttttggcttcgaaacggatttacgaacgcacact
caaggccaagcgttttgccaatctgtttttcatcattggcagattgtacctggagatcct
ctggataaaagcattaacatgagaccgttagaaccacaaccagccacccatttggccaga
gaatttatgctgaaaacgcgaagacgcaagggactatccgaggacgtatccatcaacaag
ttcttcgatgatcctatgttgctcgagttagctcggcaggatgtgttgctaaattatccc
ctttaa
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