Anabaenopsis elenkinii: IM676_06170
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Entry
IM676_06170 CDS
T09787
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
aee
Anabaenopsis elenkinii
Pathway
aee03030
DNA replication
aee03410
Base excision repair
aee03420
Nucleotide excision repair
aee03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IM676_06170 (ligA)
03410 Base excision repair
IM676_06170 (ligA)
03420 Nucleotide excision repair
IM676_06170 (ligA)
03430 Mismatch repair
IM676_06170 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aee03032
]
IM676_06170 (ligA)
03400 DNA repair and recombination proteins [BR:
aee03400
]
IM676_06170 (ligA)
Enzymes [BR:
aee01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
IM676_06170 (ligA)
DNA replication proteins [BR:
aee03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
IM676_06170 (ligA)
DNA repair and recombination proteins [BR:
aee03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
IM676_06170 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IM676_06170 (ligA)
MMR (mismatch excision repair)
DNA ligase
IM676_06170 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
IM676_06170 (ligA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
Nlig-Ia
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
BRCT_2
Auto_anti-p27
Zn_ribbon_NUD
Motif
Other DBs
NCBI-ProteinID:
QOV23864
UniProt:
A0A7S6U6L1
LinkDB
All DBs
Position
complement(1376866..1378914)
Genome browser
AA seq
682 aa
AA seq
DB search
MTEINSELKHIEELRQLLQQASYAYYVLDAPIMEDAIYDQLYRELYELETNYPELLTPDS
PTQRVGEKPATHFTSVRHHIPLYSLENAFNLEELQRWDKRWRRQAPNIPNIIDGVEYVAE
LKIDGSALALTYENGVLVRGVTRGDGVVGEDITQNVRTIRSIPLKLHFAGSKSFNRVEVR
GEAFLPLEVFKQINAEREKSGESLFANPRNAASGTLRQLDSRIVAQRRLDFFAYTLHISG
MDDASIANTQWEALELLATMGFPVNPNHKLCGSMAEVAAYYQYWDTERLTLPYMTDGVVV
KLNPFKLQEHLGFTQKFPRWAIALKYPAEEAPTRVENISVNVGRTGALTPLAEMRPVELA
GTTVSRATLHNSDRIVQLDIRIGDTVIVRKAGEIIPEVVRVLPELRPGDAQPFIMPTHCP
VCGQPVVRESGEAVTRCVNASCPAILKGEIEHWVSRDALDIKGLGEKLVYQLVDRGLVGS
VADLYDLTESDVCALARMGKKSAEKLIKAIAQSKNQPWSRVLYGLGIRHVGNVNAQLLTQ
KYSTVEKLATAKQSEIAGIYGIGAEIAQSVYQWFRIDPNQLLITRLQSAGLQLATREETK
TVTQVNSQLAGKILVITGTLPTLTRDEAKELIQTAGGKITNSVSKKTDYLLVGEDAGSKL
AKAEALGIPQLTESQLLEILQT
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgacagagattaactcggaactaaaacatatagaagaactacgccagttgttgcaacaa
gctagttatgcttattatgtcctagatgcaccaattatggaggatgcgatctatgaccaa
ctatatcgagaattgtatgaactagaaactaactatcctgagttactgaccccagatagt
cccacccagcgcgtgggtgagaaaccagcgacccactttacttctgtacgtcatcacatt
cccctctacagtttggagaatgcttttaatcttgaggaattgcaaagatgggataaacgt
tggcgacgacaagcgccaaatataccaaatataatagatggggtagaatacgttgcagag
ttaaaaattgatggttcagctttggctttaacctatgaaaacggggttttagtcaggggt
gtaactcgtggtgatggggtagtgggtgaagacattacccaaaatgtgcggacaattcgc
tcaattcccttaaagttacattttgctggttccaaaagtttcaaccgggtggaagtccgg
ggggaggcgtttttacctttggaggtatttaaacaaattaacgccgagagggaaaaatca
ggagagagtttatttgctaacccccgcaacgctgcatctggtacactcagacaattagac
tcccgcattgtcgcccagcgacggttagattttttcgcttataccttgcacatttccggt
atggatgatgcaagtattgctaatacccaatgggaagctttagagttattggcaactatg
ggttttcctgttaatcccaatcacaaactctgtggttctatggctgaggtagcagcatat
taccaatattgggatacagaacgcctaactttaccttacatgactgatggggtagtagtc
aagttaaatccttttaagttgcaagaacacctaggatttacccagaagttcccccggtgg
gctattgctttaaagtatccagcagaagaagcaccaaccagggtagaaaatatttctgtg
aatgtgggacgcacgggggcgttaacgcctttggctgaaatgcgccctgtagaattagcg
gggactacggtttcccgtgctactttacataatagcgatcgcattgtgcagttagatatc
cgcattggggatactgtgattgtgcgtaaagctggggaaatcatcccagaggtggtgcgg
gtactcccagaactgcgcccaggggatgctcaaccttttattatgcctacccattgccca
gtttgtggtcaaccggtggtcagagagtcgggggaagcggtgacccgctgcgttaatgct
tcctgtcccgctattctcaaaggggaaattgaacattgggtcagtcgggatgctttggat
attaaaggtctgggggagaagttagtttatcaactggtggataggggtttagtgggttct
gtcgctgatttatatgacttgacagaaagtgatgtatgtgcattagcaaggatgggtaaa
aaatccgcagagaaattaatcaaggcgatcgcccaatcgaaaaatcaaccctggtctagg
gtattatatggtttaggtatccgtcacgtgggtaatgtcaatgcccaattattaactcag
aagtactccaccgtagaaaagttagccacagctaaacaatcggagattgctggtatttat
ggtattggtgcggaaattgcccaatctgtatatcaatggttccgcattgatcctaatcaa
ttgttaattacccggttgcaatccgcagggctacaactagcgactagggaagaaacaaaa
acagtgactcaggttaattcccaattagctggtaaaatcttggtaattaccgggacatta
ccaactttaacacgagatgaggctaaagagttaattcaaacagccgggggtaagataact
aattcagtcagcaaaaaaactgattatctgctggtgggtgaagatgcgggttctaagtta
gcaaaagcagaagctttaggaattcctcagttgactgaatcccagttgttagagatattg
caaacttga
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