Aestuariibaculum sp. YM273: RBH94_13960
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Entry
RBH94_13960 CDS
T09314
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
aest
Aestuariibaculum sp. YM273
Pathway
aest03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aest00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RBH94_13960 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aest03400
]
RBH94_13960 (nth)
Enzymes [BR:
aest01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
RBH94_13960 (nth)
DNA repair and recombination proteins [BR:
aest03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RBH94_13960 (nth)
Prokaryotic type
RBH94_13960 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
Motif
Other DBs
NCBI-ProteinID:
WMI65155
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All DBs
Position
3229714..3230373
Genome browser
AA seq
219 aa
AA seq
DB search
MTKEQKIEFVITTLKELYPTIPVPLDHKDPYTLLIAVLMSAQSTDVRVNQITPLLFEKAD
NPYDMVNLTVEEIREIIKPVGLSPMKSKGIHGLSKILIEKHNGEVPQNFEDLEELPAVGH
KTAGVVLSQAFGIPAFPVDTHIHRLMYRWNLSNGKSVAQTEKDAKRLFPMELWNDLHLQI
IWYGREYSPARGWNLENDIITKTIGRKSVINDYYKTKKS
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaggaacaaaagattgaatttgtaataactaccttaaaagaattatacccaacc
attccggtacctttggatcacaaagacccttacaccttattaatcgcagtgttaatgtct
gctcaaagtacggatgttcgtgtgaatcaaattacaccgttattatttgaaaaggctgat
aacccgtatgatatggtaaatttaacggttgaagaaattagagaaatcattaaacctgtt
gggttatcaccaatgaaaagcaagggcatacatggtttatcaaaaatattaattgaaaaa
cataatggtgaggtaccacagaattttgaagatttagaagagctacctgccgtaggacat
aaaactgctggtgttgtcttgtcgcaagcctttggtattcctgcgtttccggtagacacc
catattcatcgattaatgtaccgttggaatttaagtaacggtaaaagtgttgcgcaaacc
gaaaaggatgctaagcgattatttccaatggaattatggaatgatttgcatctccaaatt
atatggtacggtcgggaatattctcctgcacgaggttggaatttagaaaacgatatcatc
accaaaacaattggaagaaaatcggttataaacgattattataaaacaaaaaagtcctaa
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