Actinidia eriantha (wild kiwifruit): 130753296
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Entry
130753296 CDS
T09464
Name
(RefSeq) 5'-3' exoribonuclease 3-like isoform X1
KO
K20553
5'-3' exoribonuclease 4 [EC:3.1.13.-]
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
130753296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aew03019
]
130753296
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
130753296
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-GeneID:
130753296
NCBI-ProteinID:
XP_057463271
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All DBs
Position
18:16582094..16604265
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AA seq
904 aa
AA seq
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MGIPAFYRWLVDKYPLAVVDVKEEEAPTVVNGVSVPVDASRPNPNGFEFDNLYLDMNGII
HPCFHPEDFPAPNTYDEVFKAVFKSIDRIFSLIRPRKLLYLAIDGVAPRAKMNQQRARRF
RAAKEAADEEQTDMLDSNVITPGTEFMALLSSALQFYLHLRMNTYPGWRGVKVILSDASV
PGEGEHKIMAYIRLQRNLPGFDPNTRHCLYGLDADLIMLALATHEIHFSILREDGSKHTN
DRSPINNRQNKRRKLKQGDVYGNNLEDHIMRQKFQFLHVWILRDYLVHDLKIPDPTVKAD
LERLIDDLVFMCMFVGNDFLPHVPSLEISEGAIDLLMAVYKKEFVRMGGYLTNSFEVNLE
RVEHFVRGVGSHENVIFRKRSQVQKERGIRFGGPSSNSGVKKIRGSINHVTDVANPVTDQ
VKLGEVGWKERFYADKFEAKTNDERERIRRDSVLKYIEGICWAMHYYYQGVCSWQWFYPY
HYAPFASDIYGLNQLEIHFILGKPFKPFDQLMGVLPAASAHALPSFYRELMTDSSSPISD
FYPSDFEIDLNGKRFSWQGVCKLPFIEESRLLSETAKVEHTLTDEEKRRNSLGMDMLFVH
KSHPLSKTIFPFYKRNNNHSKLSKAKVKKKINPEVSAGMNGYVYISDKPLCSLEIDAPIN
DMAVILKNEVVSVFYKCPSFHSHIPKPPNGVNMPGKSVSKQDVLPPPVLWHEKSNIFGRV
RSERPIPKSISGPHLAKLSHQLVRDYYPAKRLGSHGCLDVGNHIRVDDLAFQSNLKETIF
GKELNGSSEKHIAFDRTAVYPAKRLGSHGCLDVGNHICVDHLAFQSNLKETICGKELDGS
SEKCIAFERTAFCPRKWLTDKQMKNRRRKINLKKRKKAAAEGGNIMSNPEIKGEATSLGS
DKRD
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgggaatacctgcattctatcggtggctggtcgataaatacccactcgcagtcgtcgac
gtcaaagaagaagaagctcccaccgtcgtcaatggcgtctccgttcccgtcgatgcaagt
cgaccgaatcctaacggcttcgaattcgacaatctttaccttgacatgaacggaatcatt
catccgtgtttccaccccgaagactttcctgctccgaatacctatgatgaagtattcaag
gcggttttcaagtccatagataggattttctcgttgattagacctcggaagcttctttat
ttggcaattgatggtgtcgcacctcgtgctaagatgaatcaacaacgagcaagacgtttc
cgagctgcaaaagaagcagctgatgaagagcaaactgacatgctggattcaaatgttatc
acacctggaactgaattcatggccttactatcatcagctcttcaattttacttacacttg
aggatgaacacctatcctgggtggaggggagtcaaggtcattctttctgatgccagtgtg
cctggtgaaggggaacataagataatggcttacattcgcttacaaagaaatctgccagga
tttgatccaaacacaaggcattgtttgtatggactggatgcagacttgatcatgcttgcg
ttggctactcatgaaattcatttttcaattctgagagaggatgggtccaagcacacaaac
gatagaagtccaataaacaataggcagaacaaaaggaggaagttgaagcaaggggacgtg
tatggaaacaacttagaagaccatatcatgaggcagaaatttcagtttctccatgtatgg
atactcagggattatctagtgcatgacttgaaaatacctgatccaacagtaaaagcagat
ttggaacgcttaattgatgatttggtcttcatgtgcatgtttgtgggaaatgactttctc
cctcacgtgccatcattggagatatctgagggggctattgacctactcatggctgtctac
aagaaggaatttgttcgtatgggtggctatctgactaattcatttgaggtaaatttggaa
cgtgttgagcactttgtacggggggttggttctcatgagaatgtaattttcaggaaacgt
agccaggtgcaaaaagaaaggggaattcgttttggaggtccttctagtaattctggtgtt
aagaagattcggggctcgataaaccatgtaactgacgttgcaaatcctgtaaccgaccag
gttaagctaggagaagtgggatggaaagagagattctatgctgacaagtttgaggctaaa
acaaatgatgaacgtgagagaattcgtagagactcggtcttgaaatacatagaaggaatt
tgttgggccatgcattactactatcaaggagtgtgctcttggcaatggttctatccctat
cattatgctccctttgcttcagatatctatggtcttaatcagttggaaattcacttcata
cttgggaaacccttcaagccatttgatcagttgatgggtgtattgcctgctgcaagtgcc
catgcacttccttccttttacagggaattgatgacagattcatcatcacctatttcagac
ttctatccttctgattttgagatagatttgaatggaaaacgtttttcctggcagggtgtt
tgcaaattaccatttattgaggagtcccgtcttctctcagaaactgcaaaggtggagcac
acattgacggatgaagaaaaacgaagaaacagtttgggtatggacatgctctttgttcac
aaatctcatcctttatcaaagacaatatttcctttctataagcgaaataacaatcattcc
aagttatccaaggctaaagtcaaaaagaagatcaaccctgaagtgagtgctgggatgaat
ggatatgtgtatatttctgataagcctttgtgttctttggagattgatgcaccgatcaac
gacatggcagtgattttgaagaatgaagtcgtatctgtcttctataaatgcccttctttt
cattctcatatcccgaaaccaccaaacggagtaaatatgcctggaaagtctgtcagcaag
caggatgttctacctccacctgttctatggcatgagaagtcgaacatttttggacgtgta
cgttctgaaaggcccatccccaagtctatctcaggtccacatcttgcaaaattgtctcat
cagcttgttcgtgattattatcctgcaaaacgactgggaagccacggatgcttggacgtt
ggcaaccatatacgtgtggatgacctggcattccagtcaaacttgaaagaaacaattttt
gggaaggaattaaatggaagcagtgaaaagcacattgcttttgatcgcactgctgtttat
cctgcaaagcgactgggaagccacggatgcttggacgttggcaaccatatatgtgtggat
cacctggcattccagtcaaacttgaaagaaacaatttgtgggaaggaattagatggaagc
agtgaaaagtgcattgcttttgaacgcactgctttttgtcctagaaaatggttgactgat
aagcaaatgaaaaataggaggaggaaaattaatttaaagaaacgaaagaaagcagcagca
gaagggggtaatattatgtccaatccagaaataaaaggagaggccactagtcttggctca
gataagagggattag
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