KEGG   Actinidia eriantha (wild kiwifruit): 130765839
Entry
130765839         CDS       T09464                                 
Name
(RefSeq) DNA-directed RNA polymerase IV subunit 1-like
  KO
K16250  DNA-directed RNA polymerase IV subunit 1 [EC:2.7.7.6]
Organism
aew  Actinidia eriantha (wild kiwifruit)
Pathway
aew03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:aew00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    130765839
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aew03021]
    130765839
Enzymes [BR:aew01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     130765839
Transcription machinery [BR:aew03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     130765839
SSDB
Motif
Pfam: RNA_pol_Rpb1_2 DUF3223 RNA_pol_Rpb1_3 RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_4
Other DBs
NCBI-GeneID: 130765839
NCBI-ProteinID: XP_057478389
LinkDB
Position
25:16986106..17003297
AA seq 1460 aa
METELSLEQQVPSGVLTGINISILNDTDAEKVSVLSIETASEVTDPKLGVPNPTSQCATC
GAKDVKSCEGHFGVIKFPFTILHPYFISETAQILNKICPGCKSIRRAKPKVTGSKRQPRN
CRYCDGGFRDYYPQMNFKVSSNDVFGKTAIIVEVKERFSKKSENRSSGEVLASDYWDIIP
KDVQQEESSMKPNRRILSHAQVYHMLKDVDPKFLNECVVKKHSLFLNCFLVTPNCHRVSE
FRQHVVFDGRTRAFKKLVSFRGTANELSLRVLDSLRTSKIHSEKPSATDIAPNSTSGLKH
IKELLLGKRSDHVFRMVIVGDPNIKLSEIGIPCHIAERLHVSEHLNSWNSEKLNTCCNLR
ILEKGEIFVRRKDNLLRVTSMDKLQIGDTVYRPLNDGDIVLINRPPSIHQHSFIALSVKV
LPINSVLSINPLVCSPFRGDFDGDCIHGYVPQSIDSRIELQELVALDKQLINGQSGRNLL
SLSHDSLTAAHLVVEDGVVLNLHQMQQLQMFCPRQIQLPAIVKAPLKANPPNTCFWSGKQ
LFSLLLPPDFDYDFPSNDVRICNGELLSSTDGSSWLRDSEGNLLDCLVKRCQEKSLDFLH
AAQEVLCEWLSMRGLSVSLCDLYLSSDSYSRENMIGEVSYALQEAERISHTKLLMVDSKR
DFLIGSEESIDAVDFGAERMCYEKQKSAALSQVSVSGFKQVFWDIQNLIYQYANTDNSLV
AMLKAGSKGNLLKLVQHSMCLGLQHSLVPLSFRMPHRLSCAAWNDHKAPASSHATQDNPE
CTRRFIPCAVVENSFLSGLNPLECFAHAVTTRDISFSDNADLPGTLNRRLMFFMRDLYLG
YDGTVRNSYGNQLVQFSYSIKDTVSNNSTDGSFCDSTCGAMGSEPVGSLAACAISEAAYS
ALDQPISPLESSPLLNLKKVLECGVKKSTGDKTASLFLSKKLGRWTHGFEYAALEVQSHL
ERLLFSDIVSNVMIFFYLKPSSSRRTCPWVCHFHISKEMAKRRRLNVRSIVDALYMQWNS
SGTKSKTNIPKLQITSEVCSVADTKKENNAIICITVTLVDGARNSGIQLDNLQDVVIPYL
LGTVVKGFPEFKKVDILWKELPNASRSHRSPGELYLRVFMSEECERKRFWSGLVDSCLEI
MDMIDWERSHPDDIHDLTLAYGIDVARQYFLTRLKSAISDTGKTILPEHLLLAADCLSST
GEFVALNAKGLADQRKRMSVSAPFTQACFSNPADCLIKAAKKGVLDNLQGSIDALSWGKM
PSIGTGGRFDIIYSGKGHELAKPEDVYKLLGSHVSSHEQNVKVKVPDERNGMSDKWYHRP
LRTNCDSFLKGHKSLEISKMIRSFISLKDVLKMSQALQCMLKSYPINHRLSEVDKSIAMM
ALYFHPRRNEKIGSGAQEIKVGYHSEHDNSRCFFVVRIDGTVEDFSYHKCVHRALEIIAP
QRAKTYSLNKFKEGSVKGKQ
NT seq 4383 nt   +upstreamnt  +downstreamnt
atggagactgaattgagtttagagcagcaagtgccatcaggggtcctgactggcataaat
atcagtatcctaaatgacacagatgctgagaaagtatcggttttatcaatcgaaacagca
agtgaagtgacagatccaaagttgggtgtgcctaatccaacctctcagtgtgccacctgt
ggcgccaaggacgtaaaaagttgtgaaggacactttggggtaatcaaattcccattcacg
atactccacccatattttatatcggaaactgcacaaattttgaataaaatttgtccagga
tgtaaatctatcaggcgtgctaagcccaaggttactggttcaaagcgccaacctcggaac
tgcagatattgtgatggaggtttcagagactactatcctcaaatgaattttaaagtttcc
tcaaatgatgtgtttggaaagactgctattatagtggaagtgaaggaaaggttttcaaag
aagtctgaaaatagaagttccggggaagttttggcttctgattattgggatattattcca
aaagatgtacaacaggaagaaagttctatgaagccaaacagaagaattttatcgcatgcc
caggtctatcacatgttaaaagatgttgatccaaagtttcttaatgagtgtgttgtgaaa
aaacattcactcttcctcaactgtttccttgtaactcccaactgtcatcgtgtatcagaa
ttcaggcagcatgtggtatttgatggacgcacaagggctttcaaaaagctggttagtttt
agagggacggccaatgagttgagtttgcgggttcttgatagcctaagaacttccaagata
cactctgaaaagccatcagctacagatattgctcccaacagtacgtctggtctgaagcat
atcaaagaactacttcttgggaagcgaagtgatcatgtcttccgcatggttatagttggt
gatccaaatataaaacttagtgaaattggtatcccatgtcatattgcagagagattgcac
gtctcggaacatttgaactcatggaattcagagaaactcaacacttgttgtaatctacgg
attcttgaaaagggagagatttttgttcgcagaaaagataaccttcttcgcgtaacttct
atggataagttgcagattggagacactgtatataggccgctcaatgacggggatattgtg
ttaataaataggccgccgtctattcatcagcactccttcattgctctatctgtgaaggtg
cttccgataaactcagttctttcgattaacccactcgtctgttctccttttcgtggggat
tttgatggtgattgcatacacggttatgttcctcaatcgatcgactccagaattgagctc
caagagcttgttgctctggacaagcagttgattaatggacagagcggtagaaacctcctt
tcactaagtcacgatagtttaactgcagctcatttggttgtggaggatggagtggttttg
aaccttcaccaaatgcagcagctacaaatgttctgtccccgtcagattcaattgccagcc
attgtaaaagctcctctcaaagcaaatccaccaaatacttgtttctggtcggggaagcaa
ttattcagcttgctcctccctccagattttgattatgactttccatcaaacgatgttcgt
atttgtaatggtgagcttttgtcgtccactgatggatcttcttggttacgtgacagtgaa
ggaaaccttttagattgtcttgtcaaacgttgccaagagaaatctctcgacttcttgcac
gctgctcaggaggttctttgcgagtggttgtcaatgaggggcttgagtgtatcattgtgt
gatctttacctctcctcggattcatactcgagagaaaatatgattggtgaagtctcttat
gctttacaagaagccgagcggatctctcataccaaacttttgatggtagattccaaacgg
gatttccttattggaagtgaagaaagtatcgacgccgtggattttggagcagagcgcatg
tgttatgagaaacagaagtcggctgcgcttagtcaagtttctgtctctggttttaagcaa
gttttctgggatattcaaaacctaatataccaatatgcaaatacggacaattcgttagta
gccatgttaaaggctggaagtaaaggcaatttgttaaaattagtccagcatagcatgtgc
ttgggtttgcagcattcattggttccattatcattcagaatgccccatcggctttcttgt
gctgcatggaacgatcacaaggcaccggcttcaagtcatgcgactcaggataatcctgaa
tgtactaggcgattcattccgtgtgctgtggttgaaaattccttcctctcgggattgaat
cccctagaatgtttcgctcatgcagtaacgactcgagatatttccttcagtgacaatgct
gatcttcctgggactttgaatcggaggctgatgtttttcatgcgtgatttgtaccttgga
tatgatggcacagtgagaaattcttatgggaatcaacttgttcagttctcttatagtatc
aaggacactgtttcaaataattctactgatggttccttctgtgattccacttgtggtgcc
atgggtagcgaacctgttggttcgttggctgcttgcgccatttctgaggctgcatatagt
gctttagatcaaccgattagtcccctcgaatcatcacctctattaaatctaaagaaagtc
ctggagtgtggagtgaaaaaaagtaccggtgataaaactgcttcactgttcttgtccaag
aaactcggaagatggactcatggttttgagtatgcagctttagaagtccagtctcatttg
gagagactactcttttcagatattgtttctaatgttatgatattcttctatctaaagccc
agtagtagtagacgtacctgtccatgggtttgtcatttccatataagcaaggagatggca
aagaggagaagactaaacgtgcgctctattgttgatgccctttacatgcagtggaactcc
agtggtaccaaatcaaaaaccaatattccaaaattgcagataacaagcgaggtttgttct
gtagctgacaccaaaaaagaaaataatgctataatttgcataacagtcacattggttgac
ggtgccaggaactcagggatacaactggataaccttcaagatgttgtgataccgtacctt
ctaggaactgttgtaaaagggtttcccgagttcaagaaggtggatatcttatggaaagag
ttgccaaatgcatcaagatctcatagaagtcctggtgagctctacttgagagttttcatg
tccgaggaatgtgaaaggaaaagattctggagtggccttgtggatagttgcctggagata
atggatatgatcgactgggaacgaagtcatccagatgatatccatgatttgactttggcc
tatggaatagatgttgcacggcaatattttcttactaggttaaagtctgcaatatccgac
actggaaagactatacttccagagcatttgcttctcgctgcagattgtttatcatctaca
ggagagtttgttgccttgaatgcaaaagggttggcggatcaaaggaaacgcatgtctgtc
tcagcaccgttcacacaagcttgcttttcgaatccagctgattgcctcattaaggctgcc
aagaaaggagttttggataatcttcagggtagtattgatgcattgtcatggggcaaaatg
ccttctattgggactggtggaagatttgacattatatattctggaaaggggcatgaactc
gctaaacctgaagacgtctataaactgttgggtagccatgtcagctctcatgaacagaat
gtaaaggtcaaggtacctgatgaacgtaacggcatgtccgacaaatggtatcaccgtcct
cttcgaacgaattgtgattcattcctcaaagggcacaaaagcttggagatatcgaaaatg
atcagaagtttcatatcactgaaagatgttctgaagatgtctcaggcattacagtgtatg
ctgaaatcttatccaatcaatcatcggttaagtgaagtggacaagtctattgcaatgatg
gctttgtattttcaccctcgaaggaatgagaagatcggttctggagctcaggagataaag
gttggttatcactccgagcatgacaatagccgctgctttttcgtggtaagaattgatgga
acagttgaagacttctcataccacaagtgcgtacatcgcgctcttgaaataattgctcct
caaagagcaaaaacctactccttaaataagttcaaggagggttctgtcaaagggaaacag
tag

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