Actinidia eriantha (wild kiwifruit): 130776924
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Entry
130776924 CDS
T09464
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein GP210
KO
K14314
nuclear pore complex protein Nup210
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130776924
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aew03019
]
130776924
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130776924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_GP210_15th
Ig_GP210_16th
Ig_NUP210_1st
Big_2
Ig_NUP210_7th
Ig_NUP210_5th
Ig_NUP210_2nd
Ig_NUP210_15th
Ig_NUP210_3rd
Ig_NUP210_16th
Ig_NUP210_9th
Motif
Other DBs
NCBI-GeneID:
130776924
NCBI-ProteinID:
XP_057491162
LinkDB
All DBs
Position
5:complement(14812157..14844539)
Genome browser
AA seq
1943 aa
AA seq
DB search
MSRFASVVVLLLPLLVSNASPLHSLSGPHIADVNILLPPRMTHPVEYRLQGSDGCFEWSW
DHHDILSVLPEYNLSGHCTRSARLKSIAPYSGRKETAVYATDVHTGMVIRCKVYIDNFSR
IQIFHNSVKLDLDGLATLRVRAFDNEDNVFSSLVGLQFMWQLTPEANVLPHHLVHVPLKD
SPLSDCGGLCGDLDIQIRLEDSGVFSDLFVIQGTAIGHEIVSVHLFEPHFEHMRDEIVLT
VAEAMSLDPPSPVFVLIGATVRYSLKVIRRNLPQVVTLPSPFHRWLVLNSSVAQVDAKMG
LAYSLSLGVTSIIVEDTRVAGHTHMSSLHVVLPDTLRLYILPMSHSGDLVDEINPIPSVS
RWYVVSGRDYLILLKVFSRGPGAQEIYMTESDDVKLHHDHSDYWNMLPISDDIAVNHGIN
YARILKATSYGLGKLMATLTYSAGVDETKEVLKVVQEVMVCDKVKFSIDNTNVVTQSILL
PWAPAVYQELDLKATGGCAKVSSDYKWFSSDMATVSVSAYGVVQAKKPGKVTIKVVSMYD
PFNYDEVVIEVSVPSSMVMLRNFPVETIVGSHLQAVVTMKASNGAYFYRCDAFSSSIKWK
AESESFTIANVTGKPFVFDMPSGPPCAWTYVYASTSGRTMLHATLSKEYQQFDHSFSGSI
ILKASLQIAAYPQLIVHQAGDGNQFGGYWFDLVEAEANDQLENLDELYLVPGTFLDVMLH
GGPERWGQGVKFIETVETLDEDNILLEDGVIARQISATFVSPYRISCQKLGTFRLVFKSG
NLVGDDHPLPAIAEAGLSLGCNFPSAIVLIADEPVNKPDVIWSATQAERSPGRIRATPIT
IANGRTIRISSVGISNSGKGFGNSSSLYLRWELSNCDGLASWDDACDLATTKSSWERFLV
LQNASGLCTVRATVVGFSDNEGADHSILPFGSLESGLTDAVQLRLVSTLRVHPEFNLLFF
SPEAQLNLSISGGSCFLDAVVNNSQVVEVIQRPSGLQCLQLVLAPKGLGTALVTVYDIGL
SPPLAASAAVQVADIDWIKITSPEELSLMEGSLYSIDLLAGIDDGSTFNPFQYIYMGIRV
HIDDDIVELVDNYDFPNPIDGYVKARNFIIRARNVGVTTLYVSAQQQSGGEISSQPIKVE
VYAPPRLHPSDIFLVPGASYVLTVKGGPTIGSYVEYTSMDDDTATIHKSSGRLSAVSPGN
TTVVVTIYGNGDTMICQAHGQVKVGIPSSVLLNVQSDQLAVGREMPIFPSFSEGNLFSFY
ELCRTYKWTIHDEKVLSFQVAERFHDEKYGVQSTSYWDEKDPGFIKLLYGRSAGRTEVAV
AFSCDFVSSGSFSQSRSYIASTSLWVVSDLPLALGAPVTWILPPHYTSSKLLPSSLSSYS
QYDAQSRKGAITYSLLRQCGGKNEEVQKDAITIDGGRIRTTESNNLACIQAKDRSTGRLE
VASCIRVAEVSQIRITKDFHGIDLAVGAELDLPIRYYDILGIPFHEAYNVSPFDTETNHP
DIVSINVTSNDNGNVRVKAMRHGRALVRVSFSDNLQKSDYMMISVGARLYPQNPVLHLGS
WLNFSVEGLNDQMFGRWLSGNESVISVDVLSGKAAATGEGTTQVMYEGSSLKLQTAVTVL
KGYIVFIDAPTEMLTNVPFPAKGYSFPVKFSDAHDHKYEAPPNGVQVQYDCLVDPPFVGY
AKPWKDLDTGISYCLFFPYSPEHLSRSPRNSKEMKQDISVSIGVSLRGVNHISGSAAALF
VGGFSILEMDKSSMQLNLTPDANRSIITIVGNTDVEFHWRERDQLVINPIHREDLGIGGH
ARYEVNALGSKKFTDKVILMLPANGQRMEIDVNYEPGGSAASEMATSVITLWAGILGCLI
LLILTVSVFICYLDRPDRSRPSTAASTPTVAAPVTPDRRSPVVVNGQSPRTPQPFIEYVR
KTIDETPYYRREGRRRFDPQNTF
NT seq
5832 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgcttcgcttcagtggtggttcttctacttcctctgttggtgagcaatgcgtct
ccgttgcattcgttgtccggcccgcacatagctgatgtgaacatcttgttgccgccgaga
atgactcatcctgtggagtacaggctccaaggaagcgatggttgcttcgaatggtcatgg
gatcatcacgatattttatctgttctgcctgaatataatttaagtggtcattgcacaaga
agtgcccggttgaagtcaattgctccatatagtggtcgaaaggagactgctgtttatgca
accgatgtacatactgggatggtaattcgttgcaaagtttacattgacaacttctccagg
atccagatatttcataattctgtcaaacttgatttagacgggcttgcaactctccgtgtc
cgtgcctttgataacgaagacaatgtattttcatcattagtgggcttacagtttatgtgg
caactgactcctgaagctaatgtattgcctcatcaccttgttcatgttcccctaaaggac
tctcccttgagtgactgtgggggattatgcggcgacctcgacatccaaataaggcttgaa
gatagtggtgtattttcagatttgtttgtcatacaaggaactgcaattggccatgagatt
gtttctgtgcatttgtttgagccacattttgaacacatgagagacgagattgttttaact
gtagcagaagccatgtctcttgatcctccctcacctgtttttgtccttattggcgctact
gttcgttattctcttaaagttattcgtcggaatcttcctcaagtggtaactttaccatct
ccttttcatcgatggttggttttgaactcttcggttgctcaggtggatgcaaagatgggt
ttggcttattcactgagcttaggggttacatctattattgttgaggacactagggttgct
ggtcacacgcatatgtcatctctccatgtcgttctacctgatactttacgtttatacatt
ttacccatgtctcattctggtgacctcgttgacgagattaaccctattccatcggtgtca
cgttggtatgttgtttctggcagagattatctcattcttttgaaggttttctcacgaggg
cctggcgcacaagaaatctatatgacagagagtgatgatgtgaagttgcatcatgatcac
tctgattactggaatatgctcccaatttcagatgatattgctgtcaatcatgggattaat
tatgcaagaatcctaaaagcaacttcttatggactaggaaagctgatggcgactttaaca
tatagtgctggggttgatgaaacaaaggaggtcctgaaggtcgtgcaagaagtaatggtc
tgtgataaagtaaaattcagcatcgacaatacaaatgttgtaactcaaagtattctactt
ccttgggcgcccgctgtttatcaggagttggatctaaaggccacaggaggttgtgcaaaa
gtgtccagcgattataaatggttttcttcagacatggctactgtttcagtttctgcctat
ggggttgtgcaggcaaaaaagcctggtaaagtgactatcaaagtagtatctatgtacgat
ccattcaattacgatgaggtggtgattgaggtttccgtcccttcttctatggttatgttg
cgtaactttcctgtagagaccatcgtggggtcacatcttcaagctgttgtgacaatgaaa
gcttcaaatggtgcctacttttatagatgtgatgcttttagttcctccataaagtggaaa
gctgaaagtgagtctttcacaattgccaatgtgactgggaaaccgtttgtgttcgatatg
ccatctggtcctccatgtgcatggacatatgtctatgcttctacttctggtcgcactatg
ttacacgcgacgctttcaaaagaatatcaacaatttgatcattcttttagtggatccatt
attttaaaagcctccttgcagattgcagcatatccacagcttattgtgcatcaggcaggt
gacggaaaccaatttggtggttattggtttgatttggttgaagctgaagccaatgatcag
ctagaaaatttggatgaattatatcttgtccctggcacgtttttggatgttatgcttcat
ggaggaccagagcgatggggccaaggagttaagtttattgaaactgtggaaactttagat
gaagataatattcttttggaagatggagttattgcccgtcaaatatctgccacctttgtg
agtccttacagaatttcatgccaaaaactgggaaccttcaggcttgttttcaaaagtgga
aacttggttggggatgaccatcctctgcctgctatagcagaagcaggactgtcgcttgga
tgcaactttccttccgccattgtactaatagctgatgaacctgtgaataagcctgatgtc
atctggagtgcaactcaagctgagcgtagtccagggagaatacgagccactcctatcaca
atagcaaatgggcgtactattcgaatttcttcagttggtataagtaattctggaaaaggt
tttggaaattcatcctctctctacttaaggtgggaactcagcaattgtgatggtttagca
tcttgggatgatgcctgtgatttagcaaccaccaaatccagctgggagagatttttggtc
ttgcaaaatgcatcaggattgtgcactgttcgtgctaccgttgttgggttctctgataac
gagggtgctgatcattctattctaccatttggaagcttggagagtggtcttacagatgct
gtacaattacggcttgtttctactctaagagtccacccagagttcaatttattattcttc
agtccggaagctcagttgaatctctcaattagtgggggtagctgttttctggatgctgtg
gtgaataattctcaagttgtagaagtgattcagcggccatcaggtttgcagtgcttgcag
ttggtgctggctcctaaaggattgggaactgcacttgttacagtttatgatattggactt
tctcctccactagctgcttctgctgcggttcaagttgccgatatagactggataaagatt
acttccccagaagagttaagccttatggagggaagtttgtactctattgatcttttggct
ggaattgatgatggaagtacttttaaccctttccagtacatttacatgggtattcgtgtc
catattgacgatgacattgtagagcttgttgacaattatgatttcccaaatccaattgat
ggatatgtgaaggcgcgaaatttcattatccgggctagaaatgttggggttactactctt
tatgtcagtgcgcaacagcaatctgggggagaaatatcgagtcaacccattaaggtggaa
gtttatgcaccaccaagactacatcctagtgacatttttcttgtaccaggtgcatcctat
gtgcttactgtgaaaggaggcccgactattggttcctatgtggaatatactagtatggat
gatgacactgcaacaattcacaaatcttcaggacgactgtctgcagtttctcctggaaac
actactgttgttgtgacaatatatggaaatggagataccatgatttgtcaggcacatggc
caagttaaagttggcatcccttcttctgtgttattgaatgtacaaagtgaccagcttgct
gtaggtcgtgagatgccgatatttccttctttctctgagggcaatttgttttccttttat
gagctctgtaggacttacaagtggactatacatgatgaaaaggtcttgagttttcaagtt
gcagagcgctttcatgatgagaagtatggtgtccagtccaccagctattgggatgagaaa
gaccccggttttattaaactgttatatggaagatccgctggcaggacagaagttgccgta
gcattctcttgtgacttcgtctcttctggttcattctcgcagtcgaggtcttacattgcg
tctacatctttatgggtggtgtctgatcttcctcttgctcttggagcaccagtgacctgg
atccttcctcctcattacacttcatcaaaacttttgccttcgtctttgagttcgtacagt
caatatgatgctcagagtcgcaaaggagcaataacttattctttactgagacaatgtgga
ggaaagaatgaagaggtgcagaaagatgctataacaatcgatgggggtagaataagaaca
acggagagtaataatcttgcatgcattcaggcaaaggataggtcaactggaagacttgaa
gttgcatcttgcattagggttgctgaggtgtctcaaataagaataaccaaggattttcat
ggaattgatcttgctgttggtgctgaacttgatcttccaataagatattatgatatcctt
ggaattcctttccacgaggcttataatgtttctccctttgatactgagactaaccatcct
gatattgtctcgattaatgtaacaagtaatgacaatgggaatgtccgtgttaaggcaatg
cggcatggtagagctcttgtgcgagtatcattcagtgataatctgcagaaatcagattat
atgatgatttcagttggtgctcgtttataccctcagaatcccgtcctgcacctaggaagt
tggctcaacttcagtgtggaaggcttaaatgatcaaatgtttggccggtggttgagtggt
aatgaaagtgttatatctgtggacgtgttgtctggaaaagctgcagccactggtgaaggg
actactcaagtgatgtatgaaggttcaagtttgaaactgcaaacagcagttacagtgttg
aaagggtatattgtgtttattgatgctcccacagaaatgttaacaaacgttcctttcccg
gcaaaaggatatagcttccctgtaaagttcagtgatgctcatgaccacaagtatgaagct
cctccgaatggtgtgcaagtccaatatgactgtttggtggacccaccttttgtcggatat
gcaaagccatggaaggatcttgacactggtatttcgtattgcctattcttcccttactct
ccagagcatttatcacgttctcctcgcaactcaaaagagatgaaacaggacatatctgtt
tctatcggtgtttcgttaagaggagtcaaccatatatccggatctgcagccgccctcttt
gttggaggcttttccattttagagatggacaagagttcaatgcagttaaatctgacacca
gatgctaataggagtatcataaccatcgtggggaatacagatgtggaattccattggcgt
gaacgggatcaactggtgatcaatcccatccatagagaagatcttgggattggtgggcat
gcacgatatgaggtcaatgctcttgggtcgaaaaagttcacagataaagtaatcctcatg
ctcccagccaacggtcagcgaatggaaattgatgttaactacgaacctggagggagtgca
gcatcagaaatggcaactagtgttattaccttatgggcgggcattctcgggtgcttaatt
cttttgatactaacagtgtccgtcttcatttgttacctggacagaccagacagatcccgg
ccatcaacagctgcatccacaccgactgttgctgctccagtcacacccgatcgtagaagt
cctgttgttgtgaatggacagtctcctcgaacccctcaacctttcatagaatacgtgagg
aagacgatagatgaaactccatactatagacgagaagggaggaggaggttcgatccgcag
aatacgttctag
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