Actinidia eriantha (wild kiwifruit): 130777287
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Entry
130777287 CDS
T09464
Name
(RefSeq) sm-like protein LSM3B
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03018
RNA degradation
aew03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130777287
09123 Folding, sorting and degradation
03018 RNA degradation
130777287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aew03019
]
130777287
03041 Spliceosome [BR:
aew03041
]
130777287
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130777287
mRNA degradation factors
5'-3' decay
Lsm complex
130777287
Spliceosome [BR:
aew03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
130777287
Complex C
U2 snRNP components
130777287
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
TIG_SUH
Glutaredoxin
Motif
Other DBs
NCBI-GeneID:
130777287
NCBI-ProteinID:
XP_057491556
LinkDB
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Position
5
Genome browser
AA seq
97 aa
AA seq
DB search
MGSEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVE
IDDETYEEIVRTNRRTIPFLFVRGDGVILVSPPLRTA
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
atggggagcgaagaagagagcgcggtgaaagaacctctcgatctcatcagactcagcctc
gatgagagaatctacgtcaagcttcgatctgatcgtgagcttcgtggaaagcttcacgcc
tacgaccagcatttgaatatgatactgggtgatgttgaagaaattgtgaccacagtggag
attgatgatgagacctatgaggagatagttcggacaaacaggaggacaatccctttcctt
tttgtacggggagatggggtgatactggtttctccacctctgcggacagcttaa
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