KEGG   Actinidia eriantha (wild kiwifruit): 130777287
Entry
130777287         CDS       T09464                                 
Name
(RefSeq) sm-like protein LSM3B
  KO
K12622  U6 snRNA-associated Sm-like protein LSm3
Organism
aew  Actinidia eriantha (wild kiwifruit)
Pathway
aew03018  RNA degradation
aew03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aew00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    130777287
  09123 Folding, sorting and degradation
   03018 RNA degradation
    130777287
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aew03019]
    130777287
   03041 Spliceosome [BR:aew03041]
    130777287
Messenger RNA biogenesis [BR:aew03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     130777287
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     130777287
Spliceosome [BR:aew03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    130777287
 Complex C
  U2 snRNP components
    130777287
SSDB
Motif
Pfam: LSM TIG_SUH Glutaredoxin
Other DBs
NCBI-GeneID: 130777287
NCBI-ProteinID: XP_057491556
LinkDB
Position
5
AA seq 97 aa
MGSEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVE
IDDETYEEIVRTNRRTIPFLFVRGDGVILVSPPLRTA
NT seq 294 nt   +upstreamnt  +downstreamnt
atggggagcgaagaagagagcgcggtgaaagaacctctcgatctcatcagactcagcctc
gatgagagaatctacgtcaagcttcgatctgatcgtgagcttcgtggaaagcttcacgcc
tacgaccagcatttgaatatgatactgggtgatgttgaagaaattgtgaccacagtggag
attgatgatgagacctatgaggagatagttcggacaaacaggaggacaatccctttcctt
tttgtacggggagatggggtgatactggtttctccacctctgcggacagcttaa

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