Actinidia eriantha (wild kiwifruit): 130786202
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Entry
130786202 CDS
T09464
Name
(RefSeq) ABC transporter I family member 20
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130786202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aew03019
]
130786202
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
130786202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
Zeta_toxin
AAA_15
AAA_23
AAA
Arf
AAA_30
ATP-synt_ab
AAA_28
nSTAND3
ORC-CDC6-like
AAA_7
TsaE
Motif
Other DBs
NCBI-GeneID:
130786202
NCBI-ProteinID:
XP_057502429
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All DBs
Position
10:482041..485196
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AA seq
329 aa
AA seq
DB search
MAVKEISNPIVEINSLSFTYPAIDGHPPPGSTPLIADFTLTLRSGDRCLLVGSNGAGKTT
ILKILGGKHMVEPNMVRVLGRSAFHDTALTSSGDLCYLGGEWRREVAFAGFEVPIQMDVS
ANKMIFGVSGIDPQRRDELIKVLDIDLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEI
TVDLDVLARADLLKFLRKECEERGATIIYATHIFDGLEDWPSHIVYVAHGKLQLAMPMDK
VKEISNMSLMRTVEQWLRKERDEERKRRKERKANGLPEFEKQVEGSRVAGDPARAAVRAI
NNGWAAGRLNSTLAGEDNFVFSSNRVLRQ
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgaaggagatttcgaatccaattgtcgagatcaatagcctgagcttcacctac
cccgcaatcgacggccaccctccgccggggtccacccctctcatcgccgatttcactctc
actctccgctccggcgaccgctgcctcctcgtcggatccaatggcgccgggaaaacaacg
attctgaaaatattgggagggaagcacatggtggagccaaatatggttcgcgtgctcggg
agatcggcttttcacgataccgctttaacgtcttctggcgatctctgctatcttggagga
gagtggaggagagaggttgcttttgctggatttgaggttccaatacaaatggatgtttca
gctaacaagatgatttttggggtctctgggattgatcctcaaagaagagatgaactgatc
aaggttttagatattgatctatcatggagaatgcacaaagtttctgatggtcagagaaga
cgtgtacagatttgtatgggtctcttaaagccattcaaggttcttcttctcgatgagatc
acagttgaccttgatgttcttgcaagggctgacctgttgaagtttcttagaaaggaatgt
gaagagcggggtgctacaatcatatatgccacacatatattcgatggtctagaggattgg
ccatcacatattgtttatgtggctcatggtaaattgcaattagcaatgcctatggataaa
gttaaggaaatcagcaatatgtcgttgatgagaacggtggagcagtggctgagaaaagaa
agagacgaggagaggaagagaaggaaagagaggaaggcaaatggtcttccagagtttgag
aagcaagttgagggtagtcgtgtggctggggatcctgcccgtgctgctgttcgtgcaatc
aacaacggttgggcagcgggaaggctcaactccaccctagccggcgaagacaattttgta
ttcagctcaaacagagttctgagacaataa
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