KEGG   Aeromicrobium chenweiae: C3E78_12075
Entry
C3E78_12075       CDS       T05410                                 
Name
(GenBank) DNA ligase (NAD(+)) LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
aez  Aeromicrobium chenweiae
Pathway
aez03030  DNA replication
aez03410  Base excision repair
aez03420  Nucleotide excision repair
aez03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:aez00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    C3E78_12075
   03410 Base excision repair
    C3E78_12075
   03420 Nucleotide excision repair
    C3E78_12075
   03430 Mismatch repair
    C3E78_12075
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aez03032]
    C3E78_12075
   03400 DNA repair and recombination proteins [BR:aez03400]
    C3E78_12075
Enzymes [BR:aez01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     C3E78_12075
DNA replication proteins [BR:aez03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     C3E78_12075
DNA repair and recombination proteins [BR:aez03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     C3E78_12075
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     C3E78_12075
   MMR (mismatch excision repair)
    DNA ligase
     C3E78_12075
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      C3E78_12075
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD HHH_5 HHH PTCB-BRCT Nlig-Ia BRCT_2 Auto_anti-p27 HHH_3
Other DBs
NCBI-ProteinID: AWB92881
UniProt: A0A2S0WNJ0
LinkDB
Position
complement(2493045..2495153)
AA seq 702 aa
MANDDELRQRHKWLSETIMEHRERYYVDDSPTVSDAEYDQLMRELEGLEEQMPELRTPDS
PTQTVGGYASSSFESYEHRERMLSLDNAFSVEELESWHGRLVREGVTDADFLCELKVDGL
AISLTYENGRLTRGVTRGDGRVGEDVTNNVRTIKVIPHQLKESADYPIPAYVEVRGEVFF
PTKEFEAFNAEWAESGKTPFANPRNAAAGTLRMKDASVTAGRPLSMVCHGLGYREGFTPT
RQSEAYDALKAWGLPTSDRAKVVTSLAEVEEFIDYYGEHRHDVVHEIDGVVVKVDQVDRQ
RRLGATSRAPRWAIAWKYPPEEVNTRLLDIRVNVGRTGRVTPFGVMEPVRVAGSTVEMAT
LHNQHEVKRKGVLIGDMVVLRKAGDVIPEIVGPVVSLRDGSEREFVMPTECPSCGTPLAP
SREGDKDIRCPNTRSCPSQLRERLSHVGSRGAFDIEVFGWEGATALLEAGVLTDEGGLFA
LTRDDLMKVGLYTRAAKKNEADQAVDGRVLSANGIALLDNLEKAKTQPLWRVLVALSIRH
VGPTAARALATHFATMDRIREATVEEISAVDGVGPTIAEALVEWFGVDWHRGIVDQWRAA
GVRMQDERDESIPRTLEGLTIVVTGSLERFTRDSVKEAIIAHGGKASGSVSKKTDFVVVG
ENAGTKADKAEELGRPILDEEGFERLLAEGPPPAEDEAPAES
NT seq 2109 nt   +upstreamnt  +downstreamnt
atggcgaacgacgacgagctgaggcagcggcacaagtggctctccgagacgatcatggag
caccgcgagcgctactacgtcgacgactcgccgacggtctccgacgccgagtacgaccag
ctcatgcgcgagctcgaagggctcgaggagcagatgcccgagctccggacgcccgactcg
cccacgcagacggtcggcggctacgcgtcgtcgtcgttcgagtcctacgagcaccgcgag
cggatgctgagcctggacaacgcgttctcggtcgaggagctggagtcctggcacggccgt
ctggtgcgtgagggcgtcaccgacgcggacttcctctgcgagctcaaggtcgacggcctg
gccatctcgctgacgtacgagaacggccggctgacccgaggcgtcacccgcggtgacgga
cgcgtcggcgaggacgtcaccaacaacgtccgcacgatcaaggtcatcccgcaccagctc
aaggagtccgccgactacccgatcccggcgtacgtcgaggtccgcggcgaggtgttcttc
ccgaccaaggagttcgaggccttcaacgccgagtgggccgagtccggcaagacgccgttc
gcgaacccgcgcaacgccgcggcggggacgctgcgcatgaaggacgcgtcggtgaccgcg
ggccggccgctgtcgatggtctgccacgggctcggctaccgcgagggcttcacgcccacg
cggcagagcgaggcgtacgacgcgctgaaggcctgggggctgcccaccagcgaccgagcc
aaggtcgtcacgagcctcgcggaggtcgaggagttcatcgactactacggagagcaccgc
cacgacgtcgtccacgagatcgacggcgtcgtggtcaaggtcgaccaggtcgaccggcag
cggcgcctcggcgcgacctcgcgggcaccgcggtgggcgatcgcgtggaagtacccgccc
gaggaggtcaacacgcgcctgctcgacatccgggtcaacgtgggccgcaccggccgggtc
acccccttcggcgtcatggagccggtccgcgtcgcgggttcgaccgtcgagatggccacg
ctgcacaaccagcacgaggtcaagcgcaagggcgtcctgatcggcgacatggtcgtgctc
cgcaaggccggcgacgtgatccccgagatcgtcggcccggtcgtctcgctgcgcgacggc
agcgagcgcgagttcgtcatgccgaccgagtgcccctcgtgcggcacgccgctggccccg
tcgcgcgagggcgacaaggacatccgctgcccgaacacccgctcgtgcccgtcccagctg
cgcgagcggctgagccacgtcggcagccgcggggcgttcgacatcgaggtgttcggctgg
gagggcgcgacggcgctgctcgaggccggtgtcctgaccgacgagggcggcctcttcgcg
ctgacccgcgacgacctgatgaaggtcggtctctacacccgtgcggccaagaagaacgag
gccgaccaggcggtcgacggccgggtgctgagcgccaacggcatcgccctgctcgacaac
ctcgagaaggccaagacccagcccctgtggcgggtcctggtcgccctgtcgatccggcac
gtcggcccgacggccgctcgcgccctcgcgacgcacttcgccacgatggaccgcatccgc
gaggccacggtcgaggagatctccgcggtcgacggtgtcggtcccacgatcgccgaggcc
ctggtggagtggttcggcgtcgactggcaccgcggcatcgtcgaccagtggcgggccgcg
ggcgtacgcatgcaggacgagcgggacgagtcgatcccgcgcacgctggaggggctgacg
attgtggtcaccggctcgctcgagcggttcacccgcgactcggtcaaggaagcgatcatc
gcgcacggcggcaaggcgtcgggctcggtctcgaagaagaccgacttcgtggtggtcggc
gagaacgccggcaccaaggccgacaaggccgaggagctgggccgcccgatcctcgacgag
gagggcttcgagaggctcctggccgagggaccgccaccggccgaggacgaggcccccgcc
gagtcctga

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