Anoplopoma fimbria (sablefish): 129089019
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Entry
129089019 CDS
T09102
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F-like
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04514
Cell adhesion molecule (CAM) interaction
afb04517
IgSF CAM signaling
afb04520
Adherens junction
afb04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
129089019
04517 IgSF CAM signaling
129089019
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
129089019
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
129089019
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
afb01009
]
129089019
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
afb04515
]
129089019
Enzymes [BR:
afb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
129089019
Protein phosphatases and associated proteins [BR:
afb01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
129089019
Cell adhesion molecules [BR:
afb04515
]
Immunoglobulin superfamily
Type II RPTP family
129089019
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_ROS1
Fn3_VIN3
Ig_2
fn3_2
ig
Interfer-bind
Fn3_PBP1
Ig_VEGFR-1-like_5th
Tc-R-P
fn3_SORL1
PTP-SAK
V-set
DSPc
C2-set_2
Y_phosphatase3
PTPlike_phytase
PTP-NADK
Fn3_PTPRU
Fn3_R-PTP-O
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
129089019
NCBI-ProteinID:
XP_054452309
LinkDB
All DBs
Position
3:25343165..25465129
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AA seq
1911 aa
AA seq
DB search
MGPNSHLAVPLLPREALPFLLLLSCMVFSSQADSMPSFVKSPDDQTGISGGVASFVCQAA
GEPKPRITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRTHRDEAIYECTATNSAGEIN
TSAKLTVLEETQIPHGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDMLPVDI
SSSNGRIKQLRSGALQIENSEESDQGKYECVAMNSAGTRYSSPANLYVRVRRVPPRFSIP
PTNQEVMPGGSVNLTCVAVGSPMPYVKWTTGEVELTREEDMPLGRNVLEVTNILVSANYT
CVAISSLGMIEATAQVTVKALPKPPTSLIVTETTATSVTLTWDSGNPEPVSYYMIQYRAK
SSDNGYQEVEGVATTRYSIGGLSPYSEYEFRVMAVNNIGRGPHSDPVETRTGEQAPSSPP
LHVQARMLSASTMLVQWEPPEEPNGQIRGYRVYYSSDLTPPLSAWQKHNTDDSSLTTISG
LTPDITYSLRVLGFTSVGDGPPSDILQVKTQQGVPAQPSSFEAEAELDSRIMLTWLWPVQ
DPITKYELQYWESGSENKIHVTFNPAGSYAVDGLKPDTLYRFSLAARSEMGLGVYTQPIE
ARTAQSTPSAPPQDVHLVSLTSTSLKVSWVAPPAASRHGAIVRYTVSYQALAGEDTERHE
VVDIGADASSYLLEGLEKWTEYQVWVRAHTDVGPGPESAPVRMKTKEDGSPPRKLEVEAV
NSTAIRVTWKPPLQGKQHGQIRGYQVIFSRLENGEPRGQPNIMDVALPEAQWNIEESTEH
EAIIGGLHSETTYSVTVAAYTTKGDGARSKAKVITTTGAVPGKPTMMISTTSGNTALIQW
QPPKEMVGELMGYQLQWKRTDEENYASRELRKTDDHFTVTGLHKGATYIFRLSARNRAGI
GEAYMKEIGTTEDVPSGFPFNLQVTGLTQSSTQLTWEPPLVAERNGKIVYYMVVYRDINS
QQNSTNRTADTHMTIQGLNPDTTYDIRVQAFTSKGGGPLSPSIQSRTMSNDFPTLNFGVK
AVMKTSVLLTWDLPPNYKSQMPFKILYNQQSVEVQGNLKRKLIAQLQPDTDYSFVLTSRG
NIAGGLQQQVSIRTAPDLIKTKPSTHQAQGGKMTVNLPKVQTTTRVRWYYIVVVPVSQST
RLWKNPDEMDLDELLKSSEGPVLRRRRHLDSSKPYIAAKLASLPTTFTVGDEKRYNGFYN
KPLTGAQEYQCFVLAVLRNEGTDSTANYMTFSASPYSDPIQVKESSSQGMDQPEMLWVMG
PVLAVVLIIIIVIAILLFKKKRASPLPKDDHSGGVKDSLLANSSDPVEMRRLNYQTPGPS
SHRCPNTPRMREHPPIPVIDLADHIERLKANDGLRFSQEYESIDPGQQFTWENSNMEVNK
PKNRYANVIAYDHSRVVLTSVDAVPGSDYINSNYIDGYRKQNAYIATQGPLPETLSDFWR
MVWEQRSNTIVMMTRLEEKSRVKCDQYWPVRGTETYGMIQVTMLDTVELATYSVRTFALY
KNGSSEKREVRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPSDAGPMVVHCSAGVGRTG
CFVVIDAMLERMKHEKSVDIYGHVTCMRAQRNYMVQTEDQYIFIHEALLEAATCGNTEVP
ARNLYAHIQKLTQPPPGETVTAMELEFKRLANSKAHTSRFISANLPCNKFKNRLVNIMPF
ESTRVCLQPIRGVEGSDYINASCIDGYRQQKAYLATQGPLAETTEDFWRMLWEHNSTIVV
MLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTIR
QFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVL
ERMRYEGVVDLFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT
NT seq
5736 nt
NT seq
+upstream
nt +downstream
nt
atggggcctaatagtcacctggcagtgcccctcctgcccagagaggcgttgccgttcctg
cttctgctcagctgcatggtgttctcctcgcaggcagacagcatgccaagtttcgtcaaa
tccccggacgaccagacgggcatctcgggaggagttgcgtcgtttgtgtgccaggccgcc
ggcgagccaaaacccagaatcacctggatgaagaaaggaaagaaagtcagctcccagcgc
tttgaggtgattgagtttgatgacggctcgggctccgttctgcggatccagccactgcgc
acacacagagacgaagccatttacgagtgcacagccaccaacagtgctggagagatcaac
accagtgccaagcttacagtgcttgaagagacccagatcccccatggcttccccaccatc
gatatgggtccccagctgaaggtggttgaaaggaccagaactgccaccatgctgtgtgct
gccagcggaaacccggacccggagataacatggttcaaggacatgcttcctgtggacatc
agcagcagcaacgggcgcattaaacagcttcgttcaggagctctgcaaattgagaacagc
gaggagtcggaccaagggaaatatgaatgcgttgccatgaacagtgctgggacccgttac
tcctctcctgccaatctctacgtacgagtgcgaagagtgccacccagattctcaattcca
cccaccaaccaagaggtgatgccaggcggcagcgtcaacctgacatgtgtggcggtgggc
tcgccgatgccctacgttaagtggacgacgggcgaggtggagctgacgagggaggaggat
atgcctctggggcgcaacgtgctggaggtcaccaacatccttgtgtcggccaactacacc
tgtgtggccatctcctctctgggcatgatagaagccactgctcaggtcaccgtcaaagcc
ctgccaaagccccccacctccctcattgtgactgagaccacagctaccagtgtgactctc
acttgggactccggaaacccggaacccgtctcctactacatgatccagtacagagccaag
tcctccgacaatggctaccaggaagtggaaggtgtggccactacccgatacagcataggt
ggacttagcccctactctgagtatgagtttcgtgtcatggctgtcaacaacataggccgc
gggccgcacagcgaccctgtggagacgcgcaccggtgaacaggccccctcctcgccacct
ctgcacgtccaagcgcgcatgctgagtgccagcacaatgctggtacagtgggaaccgccc
gaggagcccaacgggcaaatcaggggctaccgggtgtactacagctcagaccttacgcct
ccgctcagcgcttggcagaaacacaacaccgatgacagcagtctgactaccatctcaggc
ctgactcccgacatcacctacagcctcagggtgctgggcttcacctctgtgggtgacggg
ccgccttctgacatcctgcaagtcaaaacccagcagggagttcctgcccagccgtctagc
tttgaggctgaagccgagctggacagccgcataatgctaacatggctgtggcccgtacag
gaccccatcactaagtatgagctgcagtactgggagtccggctccgagaacaagatacat
gtgaccttcaacccagctggttcctacgctgtggatggtctaaagcctgacaccttgtac
cgcttctcgctggcagcccgttctgagatgggtttaggcgtctatactcagcccatcgag
gcccgcaccgcccagtccaccccatccgccccccctcaggatgtacatctggtcagcctg
acctccaccagcctcaaggtgagttgggtggcgccgcccgccgctagccgccacggcgcc
atcgtgcgctacacagtcagctaccaggccctggctggggaggacacggagcggcatgag
gtggtggacatcggagcagacgcctccagctatttgctggagggcctggagaagtggact
gagtatcaggtgtgggtgagggcacacactgacgtgggcccgggccctgagagtgcccca
gtgaggatgaaaactaaagaggatggtagcccccccaggaagctcgaggttgaggccgta
aactccacagcaatccgggtaacctggaagccgcccctgcaggggaagcagcacggccaa
atccgaggctaccaagtcattttctcccggcttgaaaacggtgaaccgcgaggccagcct
aacatcatggacgttgccttgccagaggcgcagtggaatattgaggagtccaccgagcat
gaggccattattggtggactgcactctgagacaacctactctgtcactgtagcagcgtac
accaccaagggagacggagcgcgtagcaaagctaaagtcatcaccactactggtgcagtg
ccaggcaagcccactatgatgatcagcaccaccagtggcaacacagcgctgatccagtgg
cagccgcctaaggaaatggtgggtgagctgatgggctaccagctgcagtggaagcgcact
gacgaggaaaactacgcctcacgcgagctcagaaagaccgacgaccatttcactgtcacc
gggctgcacaaaggcgccacctacatcttccgtctcagcgcccgtaaccgcgcgggcatc
ggcgaggcctatatgaaggagatcggcaccactgaagacgtgccctcaggcttcccgttc
aaccttcaggtcacagggctgacccagtccagcacccagctgacatgggagcccccgctg
gtagctgagaggaacgggaagatcgtgtactacatggttgtgtacagggacatcaacagc
cagcagaacagcacaaaccgcacggccgacacgcacatgactatccagggcctcaatcct
gacaccacctacgacatccgggtacaggcgttcaccagtaagggcgggggacccctcagc
cccagcatccagagcaggaccatgtccaatgattttcccaccctgaattttggtgtcaaa
gcagtcatgaaaacgtctgtcctcctcacctgggatctaccaccaaactacaaatcccaa
atgcctttcaagatcttgtacaaccagcaaagcgtggaagtgcagggaaacctgaagagg
aagctgatcgcacagctgcagccggacacagactactcttttgtgctgacaagcagaggc
aacattgctggaggtctgcagcagcaggtgtccatccgcaccgccccagacctgatcaag
actaagcccagcacacatcaggctcagggtggcaagatgactgtcaacctgcccaaggtc
cagaccaccacacgtgtcaggtggtactacatagtggtggtgccggtgtctcagtcaacc
cggctgtggaagaatccagacgagatggacctggacgagctgctcaagtcgagtgaaggc
cctgtcctgaggcgccgacgtcacctggattcctccaagccgtacatcgctgccaagttg
gcctcactgccgaccaccttcaccgtgggtgatgagaagaggtacaacggcttctacaac
aagccgctcaccggcgcgcaggagtaccaatgctttgtcctggccgtgctcagaaacgaa
ggaacagacagcactgctaattatatgacattttcagccagtccctactcggacccaatc
caagtcaaagaaagctcgtctcaggggatggatcaacctgaaatgttgtgggttatgggc
ccagtgctggctgtggtcctcatcatcatcatcgtcatcgccatcctgctctttaagaag
aagcgggcatcacccctacccaaagatgaccactctggtggggtgaaagactccctgctg
gccaactcgtctgaccccgtggagatgagaagactcaactaccagaccccaggtcccagc
tctcatcgctgccccaacactccaagaatgagagagcacccacccattccagtcattgac
cttgctgaccacatagagcgactgaaggccaacgacggcctccgcttctcccaggagtat
gagtccattgatccaggccagcagtttacctgggagaactccaacatggaggtcaacaag
ccaaagaaccgctatgcaaacgtcattgcctatgaccactccagagtggtgctcacctct
gttgacgcggttccaggcagtgactacatcaattccaactacatcgacggctataggaag
cagaatgcctacattgccacacaggggccactgccagagaccctgagcgacttctggagg
atggtgtgggagcaaagatccaacaccatcgtcatgatgaccagactggaagaaaagtca
cgggtgaagtgtgaccagtactggccggtgcgaggcacagagacctatgggatgatccag
gtcaccatgctggacactgtggagttggccacttacagcgtccgtactttcgccctctac
aagaatggatccagtgagaagagagaggtgagacagttccagttcatggcctggccagac
cacggggtgccagagtaccccacccccatcctggccttcttacggagggtaaaggcctgc
aatccttcagatgctgggcccatggtggtccactgcagtgcgggcgtgggcaggactggc
tgcttcgtcgtgatcgatgccatgctggagcgcatgaagcacgagaagtctgtagacatc
tacggccatgtgacgtgcatgcgtgcccagaggaactacatggtccagaccgaggaccag
tacatcttcatccacgaagcactgcttgaggccgccacctgcggcaacactgaggttccg
gcacgcaacctgtacgcccacatccagaagctcacccagcccccgcccggcgagacagtt
actgccatggagctggagttcaagagactggccaactccaaagcccacacgtcacgcttc
atcagcgccaacttgccctgcaacaagttcaagaaccgcctggtcaacatcatgcctttt
gagtcaacccgcgtctgcctgcagccaatccgtggcgttgagggctctgactacatcaac
gccagctgcattgacggctacagacagcagaaggcatacctggcaacacagggccccctg
gcagagactaccgaggacttctggaggatgctgtgggagcacaactccaccatcgtcgtc
atgctcaccaagctacgagagatgggacgggagaaatgtcatcagtactggccagcagag
cgttcagccaggtatcagtactttgtggtggatccaatggctgaatacaacatgccccag
tacatcctcagagagttcaaagtcacagatgccagggacggccagtccagaacaatccgc
caattccagttcaccgactggcccgagcaaggagtgccaaaaactggagaaggcttcatt
gatttcattggacaagtgcacaaaaccaaggaacagtttggacaggacggaccaatcact
gtacactgcagtgccggggttggaaggaccggagtcttcatcaccctcagcatcgtgctg
gagaggatgaggtacgaaggagtggtcgacctcttccagacggtgaagacacttcgcacc
cagcggcctgccatggtgcagaccgaggaccagtaccagttgtgctacagggcagcattg
gagtacctggggagctttgaccactatgcaacataa
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integrated database retrieval system
