Anoplopoma fimbria (sablefish): 129089170
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Entry
129089170 CDS
T09102
Symbol
ptprfa
Name
(RefSeq) protein tyrosine phosphatase receptor type Fa
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04514
Cell adhesion molecules
afb04520
Adherens junction
afb04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
129089170 (ptprfa)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
129089170 (ptprfa)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
129089170 (ptprfa)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
afb01009
]
129089170 (ptprfa)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
afb04515
]
129089170 (ptprfa)
Enzymes [BR:
afb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
129089170 (ptprfa)
Protein phosphatases and associated proteins [BR:
afb01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
129089170 (ptprfa)
Cell adhesion molecules [BR:
afb04515
]
Immunoglobulin superfamily
Type II RPTP family
129089170 (ptprfa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
fn3_2
ig
Interfer-bind
PTP-SAK
Tc-R-P
V-set
Fn3_VIN3
DSPc
Y_phosphatase3
PTPlike_phytase
C2-set_2
PTP-NADK
Ig_C17orf99
Fn3_PTPRU
PTP_tm
Fn3_ELFN
Motif
Other DBs
NCBI-GeneID:
129089170
NCBI-ProteinID:
XP_054452526
LinkDB
All DBs
Position
3:complement(9964250..10205369)
Genome browser
AA seq
1925 aa
AA seq
DB search
MDQRFRRLSPLTRGALHLLLLARLVLPSHTESMPSFIKSPDDQTGISGGVASFVCQAVGE
PKPRITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRTHRDEAIYECTATNSVGEINTS
AKLTVLEEDQIPHGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEIYWFKDFLPVDIGS
SNGRIKQLRSGGTPIRGALQIENSEESDQGKYECVAVNSAGTRYSAPANLYVRDQREVRR
VPPRFSIPPTNHEVMPGGSVNLTCVAVGAPMPYVKWMSGEVELTREEEMPIGRNVLELTN
IRQSANYTCVAISSLGMIETTAQITVKALPKPPTSLTVTETTATSVTLTWDSGNPEPVSY
YVIQYHAKVSDNGFQEIDGVATTRYSIGGLSPFSEYEFRVMAVNNVGRGPPSGVVDTRTS
EQAPSSPPLHIQARMLSSSTMLVQWEPPEEPNGQIRGYRVYYSSDHDAPLSAWQKHNTDD
SQLTTISGLTADITYSLRVLGFTSVGDGPPSDVLQIKTQQGVPAQPSGFEAEAELDSRIM
LSWLWPVQDQIIGFELLYWEENNPTNKHHATFGPAGSHAVDGLKPDTLYMFSMAAKSEMG
LGVFTQPIEARTAQSTPSAPPQEVRLLSLSSTSIKVSWVAPPTDSRHGEIAHYSLAYQAL
TGEDVERHQVSGIGADVTSYVLDDLQKWTEYSVWVRAHTDVGPGPESSAACTKTKEDVPG
APPRKVEADALNSTALRVTWKPPLSVKQHGQIRGYQLVYSRLENGEPHGQPVIMDVSLPD
AQWTDEDSTDYEAIVTGLLPETTYSVTVAAYTTKGDGARSKAKVVTTTGAVPGKPTMMIS
TTIGNTALIQWQPPKEMVGEHVGYQLQYKRAEEEAFTVKDFRKADDHFTVTGLHKGATYI
FKLCGKNRAGNGEEYVKEISTPEDVPSSYPQNLSVVGLTATSTNLAWEPPPLAERNGKIV
KYAVVYRDINSQHNNTNSTTETQMTVQGLQPDTTYDIRVQAFTSKGGGPISPSIQSRTMS
TSMPVFTKNFGVKAVMKTSVLLTWEVPETYKSQVPLKILYNQQSVEVQGNLKRKLITQLQ
PDTDYSFVLMSRGNSAGGLQQQVSIRTAPDLLKMKPARYQHDVEEGGKVTISLPRVPAEA
PVRWYYIVVVPVNPVSLRRWENPEDMDVHELLEAGADSGLQRRKRQSQDFLQPYIAAKLD
ALPEIFTLGDEKKYNGYYNKPLPGQQQYRCFVLADLTDHESVKEKEERRTFAASPFSEPI
MVKLHSGMTRQTEDPEMLWVMGPVLAVILIIIIVIAILLFKSNQERKRTSPAKDEHMAGV
KDSLLAHSSDPVEMRRLNYQTQGMREHPPIAICDLADYIERLKANDGLCFSQEYESVDPG
QQFTWEHSNLEVNKPKNRYANVIAYDHSRVILTPVDGVPGSDYVNANYIDGYRKQNAYIA
TQGPLPETLSDFWRMVWEQRTCTIVMMTRLEEKSRVKCDQYWPSRGTETYGMIQVTMLDT
VELATYSVRTFALYKNGSSEKREVRQFQFMAWPDHGVPEYPTPTLAFLRRVKACNPPDAG
PMVVHCSAGVGRTGCFIVIEAMLERMKHEKSVDIYGHVTCMRAQRNYMVQTEDQYIFIHE
ALLEAATCGNTEVPARNLYAHIQKLTQIPPGETVTAMELEFKKLANSKAHTSRFISANLP
CNKFKNRLVNIMPFESTRVCLLPIRGVEGSDYINASFIDGYRQQKAYMATQGPLAETTED
FWRMLWEHNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREF
KVTDARDGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPISVHCSAG
VGRTGVFITLSIVLERMRYEGVVDLFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSF
DHYAT
NT seq
5778 nt
NT seq
+upstream
nt +downstream
nt
atggaccagagattcagacggctgtcgcctctcaccaggggagctcttcatctcctgctg
cttgctagactggtgctgccttcacacacagagagcatgcccagcttcatcaagtccccc
gacgatcagacggggatttcgggaggagtggcgtcgttcgtgtgccaggcggtgggcgag
cccaaacctcgcatcacctggatgaagaaggggaagaaagtcagctcccagcgctttgag
gtgattgagttcgatgacggctcgggctcggtgctgcgcatccagccgttgaggacccac
cgtgacgaagccatctatgaatgcacggccaccaacagcgtgggagagatcaacaccagc
gccaagctcaccgtcttggaggaggaccagatcccccacggcttccccaccatcgacatg
gggccccagctgaaggtcgtggagagaacgcgcacggccacaatgctgtgtgcggccagc
ggcaaccctgacccggagatctactggttcaaagacttcctgcccgtggacatcggcagc
agcaacggccgcattaagcagctgcgttcaggtggtacaccaatcagaggagcgcttcag
atcgagaacagcgaggagtcggaccagggcaagtacgagtgtgtggcagtgaacagcgcc
gggactcgctactctgctccggctaacctttacgttcgagatcaacgggaagttcgccgt
gtgcccccccgtttctccatcccgcccaccaatcacgaggtgatgcccggcggcagcgtc
aacctgacctgcgtggcggtcggcgctcccatgccttacgtcaagtggatgagcggcgag
gtggagctgacccgggaggaggagatgcccatcggccgcaacgtcctggagctcaccaac
atccggcagtccgccaactacacctgcgtggccatatcctccctgggcatgatcgagacc
acggcccagatcaccgtcaaagccctgcccaagccgcctacctcgctcactgtgacggaa
accacggccaccagcgtcaccctaacctgggactctggaaacccagaaccggtgtcctac
tacgtgatccagtaccacgccaaagtctctgacaatggcttccaggaaatagatggagtg
gccacgacccggtacagcatcggcggtctcagccccttctcggagtacgagttccgtgtc
atggccgtcaacaacgtcggccgggggcctcccagcggcgtcgtggacacccgcacaagc
gagcaggcgccctcgtcgcctcccctgcacatccaggcgcgcatgctgagctccagcacc
atgctggtccaatgggaacctccggaggagcccaacggccagatccggggataccgggtc
tactacagctcggatcacgacgccccgctaagcgcctggcagaaacacaacacagacgac
agccagctcaccaccatctcaggcctcaccgcggacatcacctacagcctgagggtgctg
ggcttcacctcggtgggagacggacctccctctgatgttctgcagatcaagacccagcag
ggagttcccgctcagccgtctgggtttgaggctgaggccgagctggactcgcgcattatg
ctgtcatggctttggcctgtccaggatcaaataattggctttgaactgctctactgggag
gagaacaatcccacaaacaagcatcatgccactttcggcccagcaggctcccatgcagtt
gatggtctgaagccagacacactctacatgttttccatggctgcaaaatctgagatgggt
ttaggagtctttacccagcctattgaggccaggactgcccaatccaccccctcagcccct
ccccaggaggtacgcttgctcagcctcagctccaccagcatcaaggtgagttgggtggca
ccacccacagacagccgccacggggagatagcgcactactccctggcctaccaggcgctc
acaggggaggacgtggagcgccatcaggtgtcagggattggcgctgatgtcaccagctac
gtgctggatgacctgcagaagtggactgagtattcggtgtgggtgagggctcacactgac
gtcgggcccggcccggagagttccgcagcctgcaccaaaaccaaggaggatgtgcctgga
gctcctcccaggaaggtggaggctgatgccctcaactccactgccctcagggtgacctgg
aagcctccgctgtctgtgaagcaacatggccagatcagaggctaccagctggtctactcc
aggctagagaacggggaacctcacggccagccggtcatcatggacgtctcgctccccgat
gcccagtggactgatgaggactcaacggactatgaggccattgtaacaggtctgctgcca
gagacaacctactctgttactgtggctgcgtataccaccaagggcgatggagcgcgcagc
aaggccaaggtggtaaccaccacaggagcagtgcctggcaagcccactatgatgatcagc
accaccatagggaacactgccctaatccagtggcagcctcccaaggagatggtcggggag
cacgtgggataccagctgcagtacaagagagcagaggaggaggctttcaccgtcaaagac
ttccggaaggcagacgatcatttcacagtgacgggcctccacaagggagccacatacatc
ttcaagctgtgtggcaaaaaccgagccggcaacggggaggaatacgtgaaggagatcagc
accccagaggacgttcccagcagctatccccagaatctaagcgtggtcggtctgactgcc
acctccaccaacctggcctgggagccccctcctctggccgagaggaacgggaagattgtc
aagtacgcggtggtgtaccgagatatcaacagccagcacaacaacaccaacagcaccaca
gaaacacagatgaccgtccaaggcttgcagccggacacaacctacgacatcagagtccaa
gccttcaccagcaaggggggggggcccatcagccccagcattcagagtcggactatgtcc
acctccatgccagtgttcaccaagaactttggtgtgaaggctgtgatgaaaacctctgtc
ctgctgacctgggaagtgccagaaacctacaaatctcaagtgcctctcaagatcctgtac
aaccagcagagtgtggaggttcaaggcaacctgaagaggaagctgatcacacagctgcag
ccagacacggattattcctttgtgctcatgagccgggggaacagtgccggcggccttcag
cagcaggtttccattcgaacagccccagacctgctgaagatgaaaccggctcgataccaa
cacgatgtggaggagggtggcaaagtgaccatcagtctgcccagggtgcctgctgaagcc
cccgtcaggtggtactacatagtggttgtccctgttaacccggtttctctgaggagatgg
gagaaccctgaagacatggacgtacatgagctcctggaggccggtgctgacagcggtctg
cagagacggaagagacagagccaggacttcctgcagccctacatcgctgccaaactggac
gccctgcccgagatcttcacgctgggcgacgagaagaaatacaacggctactacaacaaa
cccctccccggccagcagcagtatcgctgctttgttctggccgacttgacggaccatgaa
tctgtgaaggagaaggaagaaagaaggacgtttgcggccagcccgttctctgagcccatc
atggtgaagctccacagtgggatgacccgacaaacagaggacccagagatgctgtgggtg
atgggtccggtgctggcggttattctcatcatcatcatagtcattgccattctgctcttc
aagagcaaccaagaaaggaaacgaacatccccagccaaagatgagcacatggcgggggtt
aaggactcactgctggcccattcctcagaccctgtggagatgaggaggctcaactatcag
actcaagggatgagggaacatcctcccatcgctatctgtgacctggcagactacatagag
aggcttaaggccaatgacggtctgtgcttctctcaggagtacgagtctgttgatccagga
cagcagttcacctgggagcactccaacctggaggtcaacaagccaaagaaccgctatgca
aatgttattgcctacgaccactccagggtcatcctcacaccagtggacggagttccgggc
agcgattacgtcaatgccaactacattgatggctacaggaagcagaatgcctacatcgcc
acacaggggccgctgccagaaactctgagcgacttctggaggatggtgtgggagcagagg
acctgcaccatcgttatgatgacccgcctagaggagaagtcacgggtgaaatgtgaccag
tactggcccagtcgaggcacagagacatatgggatgatccaggtgaccatgctggacact
gtggagctggctacgtacagcgtacgaacattcgccctatataagaatggctcaagtgag
aagagagaggttcgacagttccagtttatggcctggcctgaccatggagtgcctgagtat
cccaccccaacactggccttcctacgcagagtcaaggcctgtaaccctccagatgctgga
cccatggtggtccactgcagtgccggtgtcggccgcaccggctgcttcatcgtgatcgaa
gccatgcttgagaggatgaaacacgagaagtcggtggacatctacggtcatgtgacatgc
atgcgggctcagaggaactacatggtgcagacggaggaccagtacatattcatccacgag
gccctgctggaagctgcaacgtgtggaaacacagaggtccccgcccgaaacctgtacgcc
cacatccagaagctgacccagatccctcctggagagaccgtcaccgccatggaactggag
tttaagaaactggccaactctaaagcacatacctcaagattcatcagtgccaacctgccg
tgtaacaagttcaagaaccgcctggtgaacatcatgcctttcgagtccacccgcgtctgc
ctgctgccaatcagaggggtggagggctccgactacatcaacgctagcttcatcgacgga
tacaggcagcagaaagcgtacatggccacccagggcccgttagccgagaccacagaggac
ttctggaggatgctgtgggaacacaactccaccatcgtagtcatgctcaccaaactccgc
gagatgggacgggaaaagtgccaccagtactggcctgccgagcgctctgcacgctaccag
tactttgttgtggatcccatggctgagtacaacatgcctcagtacatcctgagagagttc
aaggtcacagacgccagggatggtcagtcgaggaccatcaggcagtttcagttcactgac
tggcccgagcaaggagtgccaaaaaccggggagggcttcatcgatttcatcggccaggtc
cataaaactaaagagcaatttggacaagatggaccaatttctgtgcactgcagtgctggt
gtcgggcggaccggtgtgttcatcaccctgagcatcgtcctggagaggatgaggtacgag
ggagtggtcgacctcttccagaccgtaaagacgctccgaactcagcggccggccatggtg
cagaccgaggaccagtaccaactgtgctaccgggctgctctggagtacctgggaagcttc
gaccactatgcaacataa
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integrated database retrieval system
