Anoplopoma fimbria (sablefish): 129090091
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Entry
129090091 CDS
T09102
Symbol
kdrl
Name
(RefSeq) vascular endothelial growth factor receptor kdr-like
KO
K05096
FMS-like tyrosine kinase 1 [EC:
2.7.10.1
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04010
MAPK signaling pathway
afb04020
Calcium signaling pathway
afb04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129090091 (kdrl)
04020 Calcium signaling pathway
129090091 (kdrl)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129090091 (kdrl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
afb01001
]
129090091 (kdrl)
Enzymes [BR:
afb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
129090091 (kdrl)
Protein kinases [BR:
afb01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
129090091 (kdrl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_3
Ig_VEGFR-1-like_5th
Pkinase
I-set
ig
Ig_2
VEGFR-2_TMD
V-set
VEGFR-1-like_Ig-like
VEGFR1-3_N_Ig-like
Izumo-Ig
Ig_4
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
129090091
NCBI-ProteinID:
XP_054453574
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All DBs
Position
4:complement(16090935..16135553)
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AA seq
1310 aa
AA seq
DB search
MVSSDCFRLFFVILCCSSLTNGHLEREHSPKILPSEDPFIRPKGDVLNLICSGPGPLRWT
HPSRSIPSKGVKVEQCDSRSPSHSHCSKLTVTSLIVNDTGSYSCKYSKNGLEHITSIYVY
VKDPEQPFVEPHPKTPEVLCFYRHETSLVVPCRTSFPDTVVTLTALRPFPEKVIKEMVWN
PKVGFKIPYEPTTEYSMLNCKTMVNGREFKSKYIPMRLTTVLNNVKITPERVRVLVGDTL
MLNCTGETSYGGRINFTWDFPKKREKQHYENKTLGPTAVVIVMSKALILPNITMEDKGVY
RCRAELDITKHKNTSAKVIVYEHPFLNVSYRYDRPSTVTVKEGRKRLVFEPKVNALPSPD
MLAWYKDGVPINKNSTCYKMSNFNLIISDVQQKHAGVFTISLGNHVKGLYRNLSYTLVVE
VKPTISEAELATVDVQPYMSGKQHQLTCTAFGIPLPNITWIWQPCLSDLAFINCTANAKP
VPVNIDDRGNYSHNWIKSINVKPELVKGKNKTVSTLVIGEAIMSGKYSCVAQNENGNSTM
TIPFYVDDHPEEITIEPRAAIEGDDVTLTCRAARYLYTDLKWLDSRNQTITSDVSSLQIS
HYSIFLSLHLHNVSEISTTGYKCQAYKLNKRVELKSAALFVDVRKRPWLSQNLTNQDVNS
SSTLMLACFALGVPRPNITWYKNRVQVEEGPGITLGKDGVLTIERVKKDDEGLYECEASN
VEGVAKTSAVVTVFGDEGKPNVEVIILVCTGAAATFLWLMLILFIRKLRKQPAQYKMGPS
IIIDPDECPLEEQNDLLQYDSSKWEFPRDRLRLGKTLGHGAFGKVVEASAFGIDKLSTCK
TVAVKMLKGGATSNERKALMSELKILIHIGHHLNVVNLLGACTKPGGPLMMIVEYCKYGN
LSNYLRGKRDDFLVYKSPDGKVVSSGSGCELSELMKRRLESVASNGSSASSGFIEDKSYC
DSEEEEEESEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVK
ICDFGLARDIYKDPDYVRKGDARLPLKWMAPEAIFDKVYTTQSDVWSFGVLMWEIFSLGA
SPYPGVQIDEEFCCRLKEGTRMRAPEYSSSEIYQTMLDCWQGEPQERPTFIELVGQLGDL
LQASVQEEGKHYIPINTALLGKMGDPSSTVLSEETPTRPVSHRDSGSTWNIKIRPASVKT
FDEVTMEDGTNENHEGGHSDSGMGLSSDNMETLKRLESLAGRPLSIMALAMKAVSKSKES
VLTDSEKEKFPPMVNSLDFSLDDSALDAGLECHSPPPDYNYVVRYSTPPV
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atggtctcatccgactgtttcagattgttctttgtcatcttgtgttgttcatcactcaca
aatggacatttggagagagagcactcgcctaagattctgccctctgaagatcccttcatt
cgacctaagggcgatgtgttgaacctcatatgcagcggtcctggcccgctgcgctggaca
catcccagtcgatcgatcccatcaaagggcgtgaaggtggagcagtgtgattccagatct
ccctctcactcacactgcagcaaactgacagtcacaagcttgattgtcaatgacacaggg
agctacagctgtaaatactccaagaatggattagaacacatcacctcgatctacgtctac
gtcaaagatcctgagcaaccatttgtggagcctcatccaaagacacctgaagtcttatgt
ttctacaggcatgagaccagcctcgtggttccttgccggacgtcctttcctgatactgtt
gttacactcacagcgttacgaccttttccagagaaggtcattaaggaaatggtctggaat
ccgaaggttggatttaagattccctacgaacccacaactgagtacagtatgctcaactgt
aaaaccatggtcaacggtcgtgagttcaagtcaaagtacatccctatgagattaactact
gttcttaataatgtgaagatcaccccggagcgtgtcagagtgttggttggagacaccctc
atgctcaactgtactggggagacatcctatggtggaagaatcaacttcacatgggatttt
ccaaagaagagggaaaagcaacactatgagaacaagacgctaggccccactgctgtggtt
attgtaatgagcaaggctttaattttgccaaacattaccatggaggataagggggtgtac
cgctgcagagctgagcttgacatcacgaaacacaagaacacctcagcaaaagttattgtc
tatgagcatccattcctcaatgtctcttataggtatgatcggcctagtactgtgactgtt
aaggaaggtagaaagaggcttgtgtttgagcccaaggtcaacgctctgccatcaccagac
atgctagcatggtataaagatggggtccctatcaacaagaattccacctgttacaagatg
tctaatttcaacttgatcatcagtgatgtgcagcagaagcatgctggggtcttcaccata
agcctgggcaaccacgttaagggcttgtacaggaatctgagctacacgctggtagtcgaa
gtgaaaccaactatttcagaagcagagcttgccactgtggacgtgcagccctacatgtcc
ggcaaacagcatcagctaacctgcactgcttttgggatacctttgccaaatatcacgtgg
atctggcaaccgtgtctatcagaccttgcgtttataaattgcaccgctaacgccaaacca
gtcccagtcaacattgatgacaggggaaattactcccacaactggattaagagcataaac
gtcaagcctgagctggttaagggaaaaaacaagactgtgagcaccctggtgataggagag
gctatcatgtcaggaaagtactcatgtgtggcccagaatgaaaatggcaacagcacaatg
acgatccctttctacgttgatgatcaccctgaggaaatcaccatcgaacctcgggcagcc
atcgagggggatgacgtcacactgacctgtcgggcggctcgctacctttacacagaccta
aagtggttggattccagaaatcaaacgatcacttccgacgtgtccagtctccagatcagc
cactactccatttttctttctctccatctgcataacgtgtctgaaatcagcactacaggt
tacaagtgccaagcatacaagctcaacaagagggttgaactcaagagtgctgcacttttt
gtggatgtgagaaaaaggccctggctgagtcaaaatctgactaatcaagatgtgaacagt
agcagcaccctgatgctggcctgctttgctctgggagttcctcgtccaaacatcacatgg
tacaaaaatcgggttcaggtggaggaaggaccaggtatcactctgggaaaagacggggtt
ctgaccatcgagagggtgaagaaagatgatgagggtctctacgagtgtgaagccagcaat
gttgagggtgttgcgaaaacaagtgctgttgttaccgtgtttggcgatgaagggaagcca
aacgttgaggtaatcattttggtgtgtacgggagctgcagcaacgttcctctggctcatg
cttatcctcttcatccgcaagttaaggaagcaaccggcacagtataagatgggcccctct
atcatcattgatcctgacgagtgtcccctcgaggagcagaatgatcttcttcagtacgac
agcagtaaatgggagtttcctcgtgaccgactgcgactaggcaaaactcttggccatgga
gcatttggaaaagtggtggaggcttctgcctttgggatcgacaagctctcaacctgcaag
actgttgctgtcaaaatgttgaaaggaggcgctacctcaaatgagcggaaagctctgatg
tctgagttgaagattctgatccacattggccatcacctgaatgtggtcaacctactagga
gcctgcacgaagccaggaggacccttgatgatgatagtggagtactgcaaatatggcaac
ttgtccaactatctgagaggcaagagagatgactttctcgtctacaagagcccggacggt
aaggtggtgtcgtcaggatcgggctgcgagctgagcgagctgatgaagcgccgcctggag
agcgtggccagcaacggaagctcagccagctctggcttcatcgaagataagagctactgc
gactcagaggaagaggaagaagaatctgaggatttatataagaaagttcttacgttggaa
gatttgatttgctacagtttccaagttgcaaaaggcatggagttcttggcttcacgcaag
tgcatccatcgtgatttggctgcacgaaacatcctgctatctgagaataatgttgtgaag
atttgtgatttcggacttgccagagacatctacaaagacccggattatgtgcgcaaagga
gatgccagactgccgctcaagtggatggcacctgaggccatttttgacaaggtctacacg
actcagagtgacgtttggtcctttggtgttctcatgtgggagatcttctctctaggtgcc
tccccgtaccctggcgtccaaattgatgaagaattttgctgcaggctgaaggaggggacc
aggatgagagcaccagaatactcgtcctctgaaatatatcagaccatgttggactgctgg
cagggggagccacaggagcgaccgaccttcattgagctggtgggacagctgggagatctg
cttcaggccagcgtgcaagaggaggggaagcactacatacccatcaacactgccctgctg
gggaagatgggagacccgtcctccacggtgctgtcagaggagacacccacacgacccgtc
tcccaccgcgactcagggagcacctggaacatcaagatccgtcctgctagtgtgaaaacc
tttgacgaggttacgatggaggatgggacaaatgagaaccacgagggcggtcattcagac
agcgggatgggcctatcgtctgacaacatggagactctgaagcgcctagaatcactggca
ggccgaccgctgagcatcatggctctagcgatgaaggcggtgagtaagagcaaagagtct
gtgctgactgactcagagaaggagaagttcccccccatggtgaactctctggacttcagt
ctggatgactcggccctggacgccggtctggagtgtcacagcccgccgcctgactacaat
tacgtggtgcgctactccaccccgccagtgtaa
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