Anoplopoma fimbria (sablefish): 129090130
Help
Entry
129090130 CDS
T09102
Symbol
sqstm1
Name
(RefSeq) LOW QUALITY PROTEIN: sequestosome-1
KO
K14381
sequestosome 1
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04137
Mitophagy - animal
afb04140
Autophagy - animal
afb04217
Necroptosis
afb04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129090130 (sqstm1)
04137 Mitophagy - animal
129090130 (sqstm1)
09143 Cell growth and death
04217 Necroptosis
129090130 (sqstm1)
04218 Cellular senescence
129090130 (sqstm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129090130 (sqstm1)
03029 Mitochondrial biogenesis [BR:
afb03029
]
129090130 (sqstm1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
afb04147
]
129090130 (sqstm1)
Membrane trafficking [BR:
afb04131
]
Autophagy
Mitophagy
Cargo receptors
129090130 (sqstm1)
Pexophagy
129090130 (sqstm1)
Aggrephagy
129090130 (sqstm1)
Xenophagy
129090130 (sqstm1)
ER-phagy
ER-phagy recepters
129090130 (sqstm1)
Other autophagy associated proteins
Midbophagy
129090130 (sqstm1)
Mitochondrial biogenesis [BR:
afb03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
129090130 (sqstm1)
Exosome [BR:
afb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
129090130 (sqstm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_5
ZZ
PB1
Motif
Other DBs
NCBI-GeneID:
129090130
NCBI-ProteinID:
XP_054453635
LinkDB
All DBs
Position
4:complement(27874417..27883951)
Genome browser
AA seq
436 aa
AA seq
DB search
MSVTVKAYLLARDESVKEVRRFTVDQEVSSSYEYLNRKTTSVFTHLKSIHLFYKDEDDDL
VAFSSDDELMMGLTCMKDSTFRLYIKEKKENRRDFPLHAFPPFTFGHPPPPPGAPQAPPH
HMAPPPLHRDVTCDGCEGPVVGTRFKCSVCPNYDLCSSCQARGTHTEHALLPIWHPLQWF
PRGKWMKRMRHCMWNQNLNLNHAQDQDQDQDQDQDKTGTSRPATDSSAPSASQANVDYLM
TIGEGVAAMLNPLGIDVDIDVEHEGQRSKVTPSPQGGXVEAEVGGASSEGSKVSSSPVXR
CTGDLSDPVHALQVCRDSDEEWTHLSPREVDPSTGELQSLQPRDQDRDQDRDQDQDQDQG
PLSGQQGPTGLREAALYPHLPQEADPRLVESLSHMLSMGFTDEGGWLTRLLQAKNFDIGA
ALDAIQYAKQPRPQQP
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgaccgtgaaggcctacctgctggccagagacgagtccgtgaaggaggtccgg
aggttcacggtggaccaggaggtgtcctccagctacgagtacctgaaccggaagaccacc
agcgtgttcactcacctgaagagcatccacctgttctacaaagatgaagatgatgacctg
gtggcgttttcctctgatgatgaactgatgatgggtctcacctgtatgaaggattccacc
ttccgcctctacatcaaagagaagaaggagaaccgtcgagactttcctctccacgccttc
cctcccttcaccttcggccaccctcctcctccacctggagctcctcaggctccgccccac
cacatggccccgcccccactgcaccgtgatgtcacctgtgacggctgcgagggtcccgtg
gtcggaacccgctttaagtgttccgtgtgtcccaactacgacctgtgttcgtcctgccag
gctcgagggacgcacaccgagcacgctctgctgcccatctggcacccgctgcagtggttc
cctcgagggaagtggatgaaaaggatgagacactgcatgtggaaccagaacctgaacctg
aaccatgctcaggaccaggaccaggaccaggaccaggatcaggacaagaccggaacctcc
agacctgctactgacagcagcgccccctctgcctcacaggccaacgtggactacctgatg
accatcggcgagggcgtagcggccatgttgaacccgctgggtatcgatgtggacatcgat
gtggagcacgagggccagaggtcaaaggtgaccccttcccctcagggtgggngggtggag
gcagaggtgggcggagccagcagtgaggggtcaaaggtcagttcatcacctgtgtgacgt
tgtacaggtgatctgtctgacccggtccatgctcttcaggtgtgcagagactccgatgag
gagtggactcacctgagccccagagaggtcgacccctccaccggagagctgcagtccctg
cagcccagggaccaggaccgggaccaggaccgggaccaggaccaggaccaggaccagggt
cccctgtcgggacagcagggtccaacaggtctgagggaggcggctctgtaccctcacctg
cctcaagaggcggacccccgtctggtggagtccctgtctcacatgctgtcgatgggtttc
accgatgaaggcggctggttgactcgtctccttcaggccaaaaacttcgacattggtgcg
gcgctcgacgccatccagtatgccaaacagccccgcccacagcagccctga
DBGET
integrated database retrieval system
