KEGG   Anoplopoma fimbria (sablefish): 129090508
Entry
129090508         CDS       T09102                                 
Name
(RefSeq) protocadherin gamma-C5-like
  KO
K16497  protocadherin gamma subfamily C
Organism
afb  Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:afb00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:afb04515]
    129090508
Cell adhesion molecules [BR:afb04515]
 Cadherins
  Protocadherins
   129090508
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 DUF7276
Other DBs
NCBI-GeneID: 129090508
NCBI-ProteinID: XP_054454131
LinkDB
Position
4:13258871..13261357
AA seq 828 aa
MTKRMGYRDWRWLALWWHHFFLLWSTINGQTRYSIPEELKQGSVVGNLAKDLGLRLSDIF
ERKLRVSSEADEQYFSVDAGKGELVVNERIDREALCGQSASCVLPLQVVLENPLSLHRIE
VEIRDMNDNSPSFHTGDMSLKISETAAVGTRFPLEGAEDSDVGSNSVKTYTLTKNDCFIL
KIKEIEDGKTVPELVLEKPLDREKRAVHQLLLTALDGGNPVMSGTSQITISVLDVNDNFP
VFDKNTYKVSLKENTEKDTFVIQIAATDADEGTNAEVEFSFGSRTPDSVLSVFEIHSLTG
EIYLKGALDYERTTSYKVEITAKDKGVPENESHCRLQIDVLDINDNTPEIVLTSKPQPVR
EDSPSGTVVALVNARDADSGNNSKVTLRLPRGSPFTLKPSFSNNYALVTSGLLDRERFSE
YNIEITATDSGSPPLSSKKTIPVSISDVNDNPPIFTQTSFNVYLKENGVPGSILYSVSAS
DLDFGENAKISYSILDSKVQDVSVSSYVYINSDNGSIYSMHSFDYEKLKVFQIQVQAKDQ
GSPSLSSNATVHVFILDQNDNAPSVIYPSSAALGSLSHQRMPRSAKAGHLVTKVTAVDAD
SGHNAWVSYKLAEATDASLFTVNMYTGEVRTKRAVSEQDDSSQRLLIEIKDDGEPVQSAT
VTVSILLEDGLHEPILDLRQKVAEPSRKTGRITLYLILSLASVSVLSLVTFLILTVKCMR
NSRSSGSCCMTRTDCDDYKNPNRNLQIQLNTDGPIKYVEVLGGDMMSQSQSFRSCMSPMS
EYSDFTLIKPSSTTDFKEVISVLDASLPDSTWTFESQQVRKKHSRPTV
NT seq 2487 nt   +upstreamnt  +downstreamnt
atgacaaagagaatgggataccgagactggagatggcttgcgctttggtggcatcatttc
tttctcttgtggagtacaataaacggacagactcggtacagcatcccggaggaactcaaa
cagggctctgtggtaggaaatctagccaaagatctgggtttgagactatcagacattttt
gagcgtaaactgcgtgtctcctctgaggctgatgagcagtatttcagtgtggatgcgggg
aagggcgagctggtggtgaacgaaagaattgacagagaggctttatgcggacaaagcgca
agctgtgtactacctctgcaggttgttcttgaaaacccgcttagtttacatcggattgag
gtagaaataagagatatgaatgacaattcgcctagttttcatacaggagatatgtctttg
aagatttctgaaacggcagcagttggaacccgttttccattggagggtgcagaagattct
gacgttggtagtaattcagttaaaacctacactttgaccaaaaacgactgttttattttg
aaaataaaagaaattgaagatggcaaaacagttccggagttagtgttagagaagcccctt
gaccgagagaagagagcagttcatcagctgctactgactgcattagacggggggaaccca
gtcatgtctggtacctcacagattacaatctcagtgcttgacgtaaatgacaattttcca
gtttttgataaaaatacatataaagtttcgttgaaggaaaatactgaaaaagatacgttt
gttatacaaattgcagcaactgatgctgatgagggtactaacgcagaagtagaattctca
tttggctcgcggacaccggattctgtattatcagtatttgaaatacattcattaacagga
gaaatatatttgaaaggagccttagattatgaaagaaccacgtcttacaaagttgaaata
actgcgaaagacaagggggtgcctgagaatgaaagtcactgtcgtttacagatagatgtt
ttagatattaatgataacactccagaaattgttctcacctctaaaccgcagcctgtgcgt
gaagactcaccaagtggcacagtggtggcattggtcaacgcacgtgacgcggactctggt
aataatagtaaagtgacattgcgactacccagaggttcacccttcactttaaaaccatcc
ttttcgaataattatgcactggttacaagtggtttattagaccgagagagattctcagag
tataatattgagatcacagccactgattcaggctctcctcctctatccagtaagaaaacg
atacctgtcagcatcagtgatgtgaatgacaacccccctatattcacacagacctccttt
aatgtgtatttaaaagagaatggggtaccaggctctatactgtactcagtatcagcatct
gacctggattttggtgaaaacgccaaaatctcctactccatcttggactctaaagtgcag
gacgtctctgtctcatcttatgtttacattaactcagataacggcagcatctacagcatg
cactcgtttgactatgagaagctgaaggtgtttcagattcaggttcaggcaaaggatcag
ggctctccgtctctcagcagcaacgccaccgtccatgtttttatcctggaccagaacgac
aacgccccctctgttatttacccctcctccgctgccctgggctccctctctcatcagagg
atgccccgctccgctaaagcgggtcacctggtcactaaggtgacggccgtggacgctgac
tcgggccataacgcctgggtctcctacaaactggcggaggccacggacgcctctctgttc
actgtcaatatgtacacaggggaggtgaggactaaacgcgctgtgtccgagcaggacgac
tcctctcagaggctgcttatagagatcaaggacgacggggaaccggtccagtccgccacc
gtcacggtgtccattctgctggaggacggcctccatgagcccatcttagacctccgacag
aaagtggccgagcccagcaggaaaactgggagaatcaccctttatttgattctctctctg
gcctcggtgtccgtgctgtctctggtgacttttctcatcttaacggtgaaatgcatgagg
aacagcagaagcagcggtagttgctgcatgacacggaccgactgtgatgattacaagaac
cccaacagaaacctgcagattcagctcaacactgatggacctataaagtacgtggaggtc
ctgggaggagacatgatgtctcagagtcagtccttcaggtcctgtatgtctccaatgtca
gagtacagtgatttcactttgattaaacccagcagcaccactgactttaaggaggtgatc
agtgttttggatgcgtctctacccgacagcacctggacctttgagagccagcaggtgaga
aaaaagcatagtagacccactgtgtaa

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