Anoplopoma fimbria (sablefish): 129090601
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Entry
129090601 CDS
T09102
Symbol
tgfb1a
Name
(RefSeq) transforming growth factor, beta 1a
KO
K13375
transforming growth factor beta-1
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04010
MAPK signaling pathway
afb04060
Cytokine-cytokine receptor interaction
afb04068
FoxO signaling pathway
afb04110
Cell cycle
afb04148
Efferocytosis
afb04218
Cellular senescence
afb04350
TGF-beta signaling pathway
afb04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129090601 (tgfb1a)
04350 TGF-beta signaling pathway
129090601 (tgfb1a)
04068 FoxO signaling pathway
129090601 (tgfb1a)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
129090601 (tgfb1a)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
129090601 (tgfb1a)
09143 Cell growth and death
04110 Cell cycle
129090601 (tgfb1a)
04218 Cellular senescence
129090601 (tgfb1a)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
129090601 (tgfb1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
afb03110
]
129090601 (tgfb1a)
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
afb04052
]
129090601 (tgfb1a)
00536 Glycosaminoglycan binding proteins [BR:
afb00536
]
129090601 (tgfb1a)
Chaperones and folding catalysts [BR:
afb03110
]
Intramolecular chaperones
Others
129090601 (tgfb1a)
Cytokines and neuropeptides [BR:
afb04052
]
Cytokines
Transforming growth factors (RSTK binding)
129090601 (tgfb1a)
Glycosaminoglycan binding proteins [BR:
afb00536
]
Heparan sulfate / Heparin
Growth factors/receptors
129090601 (tgfb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
129090601
NCBI-ProteinID:
XP_054454226
LinkDB
All DBs
Position
1:27600481..27610353
Genome browser
AA seq
386 aa
AA seq
DB search
MKLVFLALVAVYAVGNVSSMSTCKTLDLEMVKKKRIEAIRSQILSKLRLPKEPEPDQAGD
EEEIPNTLLSLYNSTKEMLREQQTQVQTDISTEQEEEEYFAKVLHKFNITERNNTGTTKT
SKSIPMYFNISGIRESVGDYRLLTSAELRILIKQTTIAFEQRVELYQGLVTSPRYLGSRF
ITNHLRDKWLSFDVTETLQSWLKGTEDEQGFQLRLFCECGQTGVDSSFSFTISGIETNRG
DLKVIQTQAKQPPYILTMSIPQNSSSHLTSRKKRSTEPKDTCTAQTETCCVRSLYIDFRK
DLGWKWIHKPTGYNANYCMGSCTYIWNAENKYSQILALYKHHNPGASAQPCCVPQTLEPL
PILYYVGRQHKVEQLSNMIVKSCKCS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaagctggtgttcttggcgctcgtggccgtgtacgcggtgggcaacgtgagcagcatg
tctacgtgtaagacgctggacctggagatggtgaagaagaagcgcatcgaggccatcagg
agccagatcctcagcaaactgcgcttgccgaaagagccggagccggatcaggcgggagac
gaggaggagatcccgaacaccctgctgtccctgtacaacagcaccaaggagatgctgagg
gagcagcagacccaggtccagacggacatctccacggagcaggaggaggaggagtacttc
gccaaggtgctgcacaagttcaacatcaccgaaagaaacaacacagggaccaccaagacc
tccaaaagcatcccgatgtatttcaacatctcggggatacgggaaagtgtgggcgattat
cgcctgctgaccagcgccgagcttcggattctcatcaagcaaaccacgatagcttttgag
cagcgggtggagctgtaccagggtcttgtgacgtcaccccgctacctcggttcccgcttc
atcaccaaccacttgagagacaaatggctgtccttcgatgtcactgagaccctgcagagc
tggctcaaagggaccgaggatgagcagggtttccaacttcggctgttctgtgaatgcggc
cagacaggtgtcgacagtagcttcagctttaccatctctgggatcgagactaatagggga
gacttaaaagtgatacaaacgcaggcaaagcaaccaccctacatcctgaccatgtccatc
cctcagaacagcagcagccacctcacctcccgcaaaaaacgctcaacggagccaaaggac
acctgcacagcccagacggagacctgctgcgtgcggagcttgtacatcgacttcagaaaa
gatctgggctggaagtggatacataagccgacaggctacaacgctaactactgcatgggg
tcctgcacctacatctggaatgctgaaaacaaatattctcagattttggccctgtacaag
catcacaacccaggagcctctgcccagccctgctgcgttccccagacactggagccactg
ccaatcctctactatgtgggaaggcaacacaaggtggagcagctgtccaatatgatcgtg
aagtcctgcaagtgcagctaa
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