Anoplopoma fimbria (sablefish): 129091971
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Entry
129091971 CDS
T09102
Symbol
ltbp1
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1 isoform X1
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
129091971 (ltbp1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
afb04990
]
129091971 (ltbp1)
Domain-containing proteins not elsewhere classified [BR:
afb04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
129091971 (ltbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
hEGF
EGF_3
FXa_inhibition
Plasmod_Pvs28
EGF_MSP1_1
EGF_2
DUF5643
Motif
Other DBs
NCBI-GeneID:
129091971
NCBI-ProteinID:
XP_054455659
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All DBs
Position
6:complement(25397532..25510421)
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AA seq
1434 aa
AA seq
DB search
MAWVRWGLFLSVGFFLSPVCVSVDQAGFRRLLVLQPGPGSAAGSSGLRLSSGQRLTYTVE
IPADHAGPVRTRRMGHQAAAAPQFSRQEQPMRRAGVNVCGGQCCHGWSTAQGSQRCTKPN
CIPQCQNGGMCLRPQLCVCKPGSNGKACELKTVATHPFPALPGNGPTNRHTAGNSNGHTN
GHNVVPNRPIPQQVPPNGYNSAPPPSNNMAQMKLSVKSARQLVRPHYVQQHIQQQILPMP
VHPGQSQQYVLKPKYYHTHTTHTQTHVQSQPERPIPLTVGHNPLHGGNHTGRIKVVFTPT
ICKLTCIGGRCHNNCELGNTTTIISENGHATDTLTAPNFRVVVCHLPCINGGKCSTRDKC
QCPPNFTGKFCQMRVQNGHQQTSGSYGQTQVHSTHTLPLTYSHGQNPVFSPSIVNIHIKH
PPEASVQVHQVSQLDNYNNNGHQLKGSQSGSSSSTSYTYHHTESSQKIQHHGYNLVYPSQ
HGYQVPQYQPVASKNTLGRCFQETAGSQCGKALPGLTKQEQCCGTIGTSWGFHKCQKCPK
KPSIPLIDCPQGYKRINSTHCQDLDECQLQGVCSNGNCLNIVGSYRCMCKSGYVPDPTLT
SCISSTPAIQEEKGACFRLVSSGRQCLHPVSTQLSKQLCCCSVGKAWGPRCDKCPPQGTV
RFKEICPGGMGYTVLPNPPVNKPVINQEPIHPLPPQPLPTPERPVEAFGKPEETIPVATT
APDKELVVPVVINRPVVEPIQPQLSPGVSTVRIEPAYPEVFERSSPPTPVEILPSNAGQD
IAPTQSAEVDECQIDPYICGQGICYNTAEGYTCHCDEGYRLDEAQTTCVDVDECLESPSL
CFGGRCKNTEGSFLCVCPQGLLVDEEGTSCFDIDECQDQRVCTRGHCQNTEGSFICHCGQ
GFRVSSVGDHCDDVDECLEEPRPCEAVGECVNNIGSYTCTCPQGYRQINGTSCRDVDECV
EEPELCSPHGECLNTEGSFLCLCENGFTASLDTPSCDDIDECGLNETLCGPRGFCENRLG
SFQCLCEQGYHESQDGRDCVDVNECELLSSVCGEAQCVNVDGSFLCMCPSGQDYNIMIAK
CEPVPTVSSVEHKECYYRLNDENLCESVLISHVTLEECCCTLGAGWGDNCEVHPCPVNGT
DQFNEMCPSGRGFLPNVDLLYGVPTSDSYRDADECTLFGKEVCKGGFCMNTVGSYECFCK
TGQDYDAVKLECREQQEAEQIDYLGICWQTVTETMTCMRPLGSNRKTTYTECCCLHGEAW
GMDCALCPPRNTEDYASMCNLGGRQAYGHDALVAGPIHEYEVSPDYSPSQEQQAVLPFYK
NEEHPIKAFEGLLAEECGILNGCENGRCVRVQEGYTCDCFDGYTLDLSRMACVDLNECSE
LNNRMSLCKNAKCINTVGSYQCVCLPGFTASDKPNYCVAATHQTSTRTVSMDGH
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
atggcttgggttcgatggggcctcttcctgtcggtcgggttcttcctctccccggtgtgt
gtgtcggtggaccaggccggcttcaggaggctgctcgtcctgcagcccggccccggctct
gctgcagggagctccgggctgaggctcagctccggacagaggctcacatacaccgtggag
atccccgctgaccacgctggacccgtccggacccgcaggatgggacaccaggcggctgca
gccccgcagttcagccggcaggagcagcccatgagacgggctggggtaaatgtctgtgga
gggcagtgctgtcatggatggagtacagctcagggatcgcagcggtgcacaaagcccaac
tgcatccctcaatgccagaatggaggaatgtgcctcaggcctcagctctgtgtctgcaag
cctggctcaaatggaaaggcatgcgaactgaagacggtggccacacatccctttccagcc
ctgcccgggaatgggcccaccaacaggcataccgctggtaactcaaatggacacaccaat
ggacacaatgtggttcccaatcggcccatacctcagcaagttcctcccaatggttataac
tctgcaccccctccatccaataacatggcccagatgaaactaagtgtcaagtcggcccgc
cagcttgtaagaccacattacgtccaacagcacattcaacaacagatcctgccaatgccc
gtgcacccaggtcagagtcagcagtatgttttaaagcccaaatactaccacacacacacc
acgcacacacagacccatgtccaatcccaacctgagaggccaatccccttgacagtggga
cacaaccctctccatgggggcaaccatacaggaaggatcaaggtggtcttcacaccaacc
atctgcaaattaacctgcataggaggcagatgtcacaacaactgtgagctgggaaacact
accaccatcatcagtgagaatggccatgctacagacaccctgacagcacctaacttcaga
gtagtggtttgtcacttgccgtgtataaatggtgggaagtgcagcaccagggacaagtgt
cagtgccctcccaacttcacaggaaagttctgccagatgcgtgttcagaatggacaccag
cagacgtcaggcagctacggccaaactcaggtccactccacacatacactgcctctgacc
tacagccacggacagaatcccgtgttcagccctagcattgtcaacatccacataaaacat
cctccagaggcctccgtccaggtccaccaggtttcccagctggataactacaacaacaac
gggcaccagctgaaaggttcccagtcaggttcctcttcatccaccagttacacctatcac
cacacagagagcagccagaagatccagcaccacggctacaacttagtttatcccagccag
catggctaccaggtcccccagtaccaacccgtcgcctccaagaacactctgggtcgttgc
ttccaggagacagcagggagtcagtgtgggaaggctctgccaggtctaactaagcaggag
cagtgctgtgggaccattgggacatcctggggtttccacaaatgccagaagtgtccaaag
aaaccatctattcctctgatagattgtcctcagggttacaagcgaataaacagcacccat
tgccaagatttagatgagtgccagctacagggagtgtgttctaatggaaactgtctgaac
atcgtgggcagctacaggtgcatgtgtaaatccggctatgtccctgacccaacactcacc
tcttgcatatccagcacgcctgccatccaagaggagaagggggcttgcttccgtttggtc
agctcagggaggcaatgtttgcacccagtttctacccagctgagcaaacagctctgctgc
tgcagtgtgggtaaagcctggggccctcgttgtgacaaatgcccccctcaaggaacagtt
aggttcaaggagatctgtccaggtggaatgggctacactgttctaccaaatccgcctgtc
aataagccagtcatcaaccaggagcccattcacccgcttcccccccaacccttgccaaca
ccagagagaccagtggaggcctttgggaagccagaagagactataccagtagcaacaact
gcaccagataaggagctggtagttcctgtggttattaataggccagtagttgaacctatc
cagccccagctatctccaggtgtatccactgtcaggatcgagccagcctacccagaggtt
tttgagaggagctctcctcccacaccagtggagatcctcccatctaatgcaggccaggat
atcgctcccacccagtcagctgaggttgatgagtgccagatcgacccttatatctgtggc
caggggatttgttacaacacagctgagggttacacctgccactgtgatgagggataccgc
ctggatgaagcccaaaccacctgtgtagatgtagatgaatgtttggaaagtccatctttg
tgctttggcggtcgctgcaagaacacagaaggcagttttctgtgtgtgtgtccacaggga
ctgctcgtcgatgaggagggaaccagttgttttgatatagatgagtgccaggatcagcgg
gtctgcaccagaggccactgccagaacactgaaggctcctttatctgtcactgtgggcaa
ggctttagagtgtcctccgtgggagaccattgtgatgatgtggatgagtgtttagaagaa
cccaggccctgtgaggctgtaggggagtgtgttaacaacattggctcctacacctgtacc
tgcccccagggataccgacagatcaacggcaccagctgcagagatgttgatgaatgtgtg
gaagaaccagagctctgttcgccccatggagagtgtctcaacacagaggggtcttttctg
tgtttgtgtgagaatggattcactgccagcctcgacacgccctcctgtgacgatattgat
gagtgtggactcaatgagacactgtgtggccctcgtggcttctgtgagaacagactgggt
tccttccaatgcctctgtgagcagggctaccatgagtcccaggatggccgagactgtgtg
gatgtgaatgagtgtgagttgctgagcagtgtgtgtggagaggcccagtgtgtgaacgtt
gatggttctttcctctgcatgtgtcccagcggccaggactataacatcatgatcgccaag
tgtgagcccgttcccacagtgtcatcagtggagcacaaagagtgctactatcgtctgaac
gatgagaacctgtgtgagagtgtgctgatcagccatgtcaccctggaggagtgctgctgc
acactgggagccggatggggtgacaactgtgaggtgcatccctgtcctgtcaatggcaca
gaccagttcaatgagatgtgtccatctggaagaggttttcttcccaatgtagacttactg
tatggagtacccacatctgacagctacagagatgcagatgaatgcacactgtttggcaag
gaagtgtgtaaaggaggcttctgtatgaatactgttggcagctacgaatgtttctgcaag
acgggacaggactacgatgctgtcaaactggagtgcagagagcaacaggaggcggagcag
atagactacctgggtatctgctggcagacggtgacagaaaccatgacatgcatgaggccg
ctgggttccaacaggaagaccacgtacacagagtgctgctgtctgcacggagaggcctgg
ggcatggactgtgctttgtgtccacccagaaacaccgaggattatgcgtccatgtgtaac
cttggcgggcggcaggcgtatggtcacgatgcccttgttgccggcccaatccatgaatat
gaagtgagcccagactattcaccatcacaagagcagcaggctgtcctgcctttttacaag
aacgaggagcatccaattaaggcatttgagggtttgctagcagaggagtgtgggattctg
aatggttgtgagaacggccggtgtgtccgggttcaggagggttacacctgcgactgtttc
gatggatacaccctggacctgtcccgcatggcctgcgttgatttgaacgagtgttcagag
ctaaacaatcggatgtccttgtgtaaaaatgcaaagtgcatcaacacagtgggctcctat
cagtgtgtgtgtctgccaggcttcactgcctctgacaaacccaactactgtgtggcagca
actcaccaaacatcaacacgcacagtgagcatggacggacactaa
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