Anoplopoma fimbria (sablefish): 129091981 Help Entry 129091981         CDS       T09102                                  Symbol slit1a Name (RefSeq) slit homolog 1a isoform X1   KO K06838   slit 1 Organism afb  Anoplopoma fimbria (sablefish) Brite KEGG Orthology (KO) [BR:afb00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:afb00536]     129091981 (slit1a) Glycosaminoglycan binding proteins [BR:afb00536]  Heparan sulfate / Heparin   Axon guidance molecules    129091981 (slit1a) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LRR_8 LRR_4 LRR_5 EGF Laminin_G_2 Laminin_G_1 LRRNT LRR_1 LRR_9 hEGF LRRCT EGF_TEN LRR_14 LRR_EndoS EGF_Teneurin EGF_DL_JAG EGF_3 LRR_NXF1-5 Motif Other DBs NCBI-GeneID:  129091981 NCBI-ProteinID:  XP_054455682 LinkDB All DBs Position 6:complement(13872169..13956203) Genome browser AA seq 1507 aa AA seqDB search MWVVMLSALLVGNASACPALCTCSGTTVDCHGLGLKTMPRNIPRNTERLELNGNNLTRIT KSDFAGLKYIRVLQLMENQITVIERGAFDDMKELERLRLNRNQLQQLPELLFQKNPGLSR LDLSENFIQSIPRKAFRGATDIKNLQLDKNHISCIEDGAFRALRGLEVLTLNNNNISSIP VSSFNHMPKLRTFRLHSNNLNCDCHLAWLAQWLRQRPTIGLFTQCTGPTELRGLNVAEVQ KHEFSCSGHQESSSFQPCSIGVGSCPAMCTCSNNIVDCRGKGLTAIPANLPDTMAEIRLE QNGIKSVPPGAFSPYKKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYGNKITDLPKGVF DGLYALQLLLLNANKIHCVRANAFQDLQNLSLLSLYDNKIQTLAKGTFTSLRAIQTLHLA QNPFICDCNLKWLADYLRSNPIETSGARCASPRRLANKRIGQIKSKKFRCSGTEDTRLNN ACNSDPVCPPKCRCESNVVDCSNLKLTRIPEHIPTSTSELRLNNNDITALEATGVFKSLS QLKKINLSNNKITEIEDGSFEGASSVNELHLTANQIDTVRSGMFRGLEGLRMLMLRNNKI SCVHNDSFTGLHNVRLLSLYDNQLTTITPGAFDTLQTLSTLNLLANSFNCDCRLGWLGDW LRTRKIVTGNPRCQRPAFLKEIPLQDVALPDFRCEEGQEELSSCVPRPQCPSECTCLETV VRCSNKHLHTLPKGIPRNVTELYLDGNQFSVVPKELSTFKFLQLVDLSNNKINSLTNSSF ANMSQLTTLILSYNSLRCIPKMAFSGLHSLRLLSLHGNEISELPDGIFNDVASLSHLAIG ANPLHCDCRLRWLSDWVKTSYKEPGIARCAGPQGMEGKLLLTTPAKKFECTGDADTTVLA KCNPCLSSPCLNQGICHSDMVEIYRCSCAPGFKGKNCETALNACVSTPCANGGTCQVNEN EEGQYSCTCPLGIEGPTCQTNIDECEDNDCENGATCLDGVNNYTCFCPPYYTGEMCEEIE DVCAPGRSPCQHQSTCLITSTGPKCVCSPGYVGDDCSVDYNDCEEHRCQNGAQCVDELNG YSCVCPEGYNGQLCEVVPSPLSLCELADCQNNAPCVERGGRALCQCPPEFGGPRCEKLVS VNFIDRDSYLLLSDLKNWPQANITLQVSTAEDNGILLYNGDNDHIAVELYQGHVKVSYDP GSQPGHAIYSTETINDGQFHTVELVTFDQMVNLSIDGGLPTTMDSFGAVRPLNGEAPLYV GGMPLDVDSGVFRLWQLQNGSSFHGCIQNLYIDNELQDFTKTQMKPGVVPGCEPCKKIYC VHGICQPDGFQGPVCHCQPGWSGPHCDQTATNPCQGSKCVHGKCIPLDSQSYRCECTEGY RGALCNQQGELFNPCRRLSCKHGRCQISDTGDSYCHCESGYTGELCDAESECRGEPVRDF YQVQRGYAICQTTRMVSWVECSGACDTGACCASQRMKRRKYTFECSDGTSFSEEVEKTIK CGCMGCM NT seq 4524 nt NT seq  +upstreamnt  +downstreamnt atgtgggtggtgatgctctctgcgctgctcgtgggcaatgccagtgcctgtccagccctg tgtacctgcagtggcaccacagtagactgccatggactgggtctcaaaaccatgccaagg aatatcccccgcaacactgaaagactggagctgaatgggaataacctcacacgcatcacc aagagtgacttcgctggactcaagtacatccgagttttgcagttgatggagaatcagatt actgtgatcgagcgtggggcttttgatgacatgaaggagctggagagactgcggctgaac cgtaatcaactgcagcagcttcctgagctgctgtttcagaagaaccctggcctatctcga ctagatctgagcgagaacttcatccagtccatccccagaaaagcattcagaggagctacg gacatcaaaaaccttcagctggataaaaaccacatcagctgcatcgaggatggagccttc agagctctgagaggtttggaagtgctaacgctgaacaacaacaacatcagcagcataccc gtctccagcttcaaccacatgcccaagctacgaaccttccgtctccactcaaacaatctg aactgtgactgtcacttggcctggttggcccagtggctcagacagaggcctacaattggt ctattcacccagtgtactggccctactgagctcagaggactcaatgtggcagaggtacag aaacacgaattcagctgctcaggtcaccaggaatcctccagctttcagccgtgcagcatc ggtgtgggctcctgccctgccatgtgcacctgcagcaacaacattgtggactgtagaggg aaaggtctcactgccatcccagccaacctgcccgacaccatggctgagatacgtctggag cagaatgggattaagtctgttcctcctggagccttctctccctacaagaaactgcgtagg atagacctgagcaacaaccagatctcagagatagctcctgatgccttccagggtctgcgc tccctcaactcccttgtgctgtatggaaataagattactgacctgcccaagggggtgttt gacggcctctacgccctgcaactgctgttgctgaatgccaataagatacactgtgttcgt gccaacgccttccaggacctgcagaatctctcgctgctatcgctctacgacaacaagatc caaacccttgccaagggcaccttcacttcactacgagccatacagacccttcacctggcc cagaacccatttatttgtgactgtaatctgaagtggctggcggactacctgcgctccaac cccatcgagaccagcggcgcccgctgtgccagccctcgccgactcgcaaacaaacgtatt ggacagatcaagagcaagaagttccgctgctccggcacagaagacacccgtctgaacaat gcctgtaacagtgatccagtgtgtcctcctaagtgccgctgtgagtcaaacgttgtggac tgctccaacctgaagctcaccaggatccccgagcacatccctacatccaccagtgaactc cgccttaacaacaatgacatcactgctctcgaggcaactggagtttttaagagcctttcc cagctgaagaaaattaacctcagcaacaacaagataacagagattgaagatggttcattt gaaggtgcgtcatccgtcaatgagcttcacctcacggccaatcagatcgacacggtccga agtgggatgttccgtggccttgagggcctgcgtatgctgatgctgagaaacaacaagatc agctgcgtccacaacgacagtttcactgggctgcacaatgtccgcctgctgtctctatac gacaaccagctgaccacaatcactccgggagcctttgacactctgcagactctctccacc ctcaacctcttagccaactcctttaactgtgactgccggctgggctggctcggtgattgg ctgaggactaggaagattgtgaccggtaaccctcgctgccagcgtcctgccttcctaaag gagattcccctgcaggatgtggctctgcctgacttccgctgtgaggagggccaagaggag ctgtcaagctgtgtgcccagaccccagtgtccaagtgaatgcacttgcctcgagactgtg gtgcgctgtagtaacaagcacctccacacactgcccaaaggcatccccagaaacgtgact gaactgtatctggatggaaaccagttcagtgttgtgccaaaggaactatccaccttcaaa ttcctacagctggtagacctgagcaacaacaagatcaactctctgaccaactcttccttc gctaacatgagccaacttaccactctaatcctgagctacaactccctgcgttgtatcccc aagatggccttcagtggactgcactctctccgactgctgtctctccatggcaacgaaatc tcagagcttcctgatggcatcttcaatgatgtggcctcactttcccacttggcaattggt gccaatcccttgcactgtgactgtcgcctgcgctggctatctgactgggtgaagactagc tacaaagagcctggcatcgcccgatgtgccggcccacagggcatggagggcaaattgctg ctcaccacacccgctaagaagtttgaatgtacaggtgatgcggacactacagtgctggcc aagtgtaacccctgtctatccagtccctgtctgaaccaaggcatctgtcacagcgacatg gtggagatctacaggtgcagctgtgctccaggattcaagggcaagaactgtgagacggct ctgaatgcctgtgtgagtaccccatgtgccaacggaggaacctgccaagtgaatgagaat gaggagggacaatacagctgcacatgtccactgggcattgagggccccacttgccaaacc aacattgacgaatgtgaggacaacgactgtgaaaacggcgcaacctgcctcgacggagtc aacaactacacttgtttttgtcccccctactacacaggggagatgtgcgaagaaattgag gatgtgtgtgccccaggacggagcccctgccaacatcagtctacctgcctcatcacctcc actggccccaagtgtgtgtgctctcctggttatgttggtgatgactgcagcgtagactat aatgactgtgaggagcatcgttgtcagaatggagctcagtgtgtggatgagctaaatgga tactcctgcgtctgtcctgaaggatacaatggtcagttgtgtgaggttgtcccatctcca ctgtccttgtgtgagctggccgactgccagaacaacgcaccatgtgtggagcgaggcggg cgcgccctctgccagtgtcctcctgagtttgggggtccacgctgcgagaagctggtcagc gtcaacttcatcgacagagactcctacctactgctctctgacctcaagaactggccacag gctaacatcaccttacaggtgtcaacagctgaggataatggtattttgctgtacaatggg gacaatgatcatattgcagtggagctctaccaaggtcatgtcaaagtcagctatgacccc ggcagccagccaggacatgccatctacagtactgagactatcaacgatggccagttccac actgtggagcttgtgacctttgaccagatggtgaacctgtccattgatgggggtctccct acaacaatggacagctttggggcggtgcggcccctcaacggggaggctccactatacgtg gggggcatgccattagatgtagactctggcgttttccgtctctggcagctccagaatggt tccagtttccatggctgtatccagaacctatacatcgacaatgagctgcaggacttcacc aagacacagatgaagcctggcgtggtaccgggctgtgagccctgcaagaagatctactgt gtacatggcatatgccagcctgatgggttccagggaccagtgtgccactgccagccagga tggagtgggccgcactgtgatcagacagctaccaacccctgccagggcagcaagtgcgtt catggaaagtgcatccctctggacagtcagtcatatcgctgcgagtgtacagagggttac cgtggtgccctgtgtaaccagcagggagagctgttcaacccctgccgtcgcctgtcctgc aaacacgggcgctgtcagatctcagacacaggagattcctactgtcactgtgaaagtggc tacacaggggaactttgtgatgcagagtctgaatgccgaggggaacctgtgcgagacttc taccaagtacagagaggctacgccatctgccagacgacacgtatggtttcttgggtggag tgctctggagcctgcgatacgggggcctgctgcgccagccagcgaatgaaacgccggaaa tacacctttgaatgcagcgatggaacctccttcagtgaggaagtggaaaagaccatcaag tgcggctgtatgggctgcatgtag

DBGET integrated database retrieval system