Anoplopoma fimbria (sablefish): 129092203
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Entry
129092203 CDS
T09102
Symbol
tnfaip3
Name
(RefSeq) LOW QUALITY PROTEIN: tumor necrosis factor alpha-induced protein 3
KO
K11859
tumor necrosis factor, alpha-induced protein 3 [EC:
3.4.19.12
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04217
Necroptosis
afb04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
129092203 (tnfaip3)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
129092203 (tnfaip3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
afb01002
]
129092203 (tnfaip3)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afb04121
]
129092203 (tnfaip3)
Enzymes [BR:
afb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
129092203 (tnfaip3)
Peptidases and inhibitors [BR:
afb01002
]
Cysteine peptidases
Family C64
129092203 (tnfaip3)
Ubiquitin system [BR:
afb04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
129092203 (tnfaip3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-A20
OTU
OTU_Vertnin
Motif
Other DBs
NCBI-GeneID:
129092203
NCBI-ProteinID:
XP_054456020
LinkDB
All DBs
Position
6
Genome browser
AA seq
831 aa
AA seq
DB search
MSQGQNFLPKFLFVSNLLKAVKIRQRVPNDVVKPAAGSGLMHHLRGMHRYTLEMIAMNHF
PQAFREVVQAAILDRAMQASLEQEKKLNWCREVKKMVPLRTNGDGNCLLHATSQYMLGVQ
DTDLVLRKALHGVLKETDTGVFRARFQAELLQSQEFTQTGLRYTTMNWEEEWEKIVKMAS
PVSSSNGLQFDSLEDIHIFVLSNILRRPIIVIADQVVRSMKSGSSISPLNVGGIYLPLHW
PPTECYKYPIVLGYDSQHFAPLITIKDSGPEIRAVPLINPGRGGFEELKVHFLMEKEQQQ
KERLLKDYLLLIEIPVIGLGYDTTRIINAARLDEGNLPEDMNLMEDYLQLVNHEYQRWQE
DKEQAWAAQPQRPPPFSVSQLSLIEIRCATPRCTFYVSVDTQPHCHECFEKRQATTGGGM
RIEGVVQTXGGGVQGGVGVIGGSEAEVSSRGARGSSPPSSTCGRAVVISSPRSAPPTAPS
LSLYSETHAMKCKTPGCLFTLSVQHDGLCERCFNSRQNHGPPGVGTAAPGLPGPTGGPTV
PHPAQGTGWTQWGGRETETETERCSMCRQEAFRIFNGLCPPCMQRQQTPERGQPQQNNPR
TEASSSAWTQARDSERPCLTITPGHTSAWQAPLARPCKRSGCQFFGTPEKLGFCTICYVD
YQTNHHMTPPAAPVQSRHGVEAGFQNASRCRGPGCGAVGKAMLEGYCDKCYVKEQSTRLN
QVANRXTPSPPLVMRERAAKPRSSQQSQTQTQTQTQTQCRRSGCSNVSPGCTDLCPECHT
RGQGREAGRRAQAPKEKSKQRCRTQGCDHYANQEKQGYCNECDHFKQIYRG
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagggtcagaacttcctccccaaattcctgtttgtctccaacctgctgaaggcg
gtgaagatccgccagcgagtgcccaacgacgtggtgaagccggctgccggcagcggcctg
atgcaccacctgcgcgggatgcaccggtacacgctggagatgatcgccatgaaccacttc
ccgcaggccttcagggaggtggtccaggccgccatcctggaccgggccatgcaggcctcg
ctggagcaggagaagaagctcaactggtgtcgggaggtgaagaagatggtgcccttacgt
accaatggtgatgggaactgtttgctgcacgcgacctctcagtacatgttgggcgttcag
gacaccgacctggtgcttcggaaagccctccatggtgttttgaaagagacggacactggc
gtcttcagagctcgcttccaggcggagctgctccagtcccaggagttcacacagaccgga
ctccgatacaccacaatgaactgggaagaggagtgggaaaagatcgtgaagatggcgtct
ccggtctccagtagcaacggcctccagtttgactctctggaggacattcacatctttgtc
ctctccaacattctccgccgacccatcatcgtcatcgcagaccaggtggtcaggagtatg
aaatctggctcctccatctctcctctgaatgtgggagggatttatctgccactacactgg
ccgcccacagagtgctacaaatacccaatagtgctcggctacgactcccagcactttgca
cccctcatcaccatcaaagacagcggtccagagatccgagcagtgccgctgatcaaccca
gggcgagggggctttgaggagctgaaggttcacttcctgatggagaaagaacagcaacag
aaggagcggcttctcaaggactacctgctgctgatagagatccccgtcatcggtttaggc
tacgacaccacgcggatcatcaatgctgcacggctggatgagggcaacctccctgaagac
atgaacctgatggaggactacctgcagcttgtcaaccacgagtaccagcgctggcaggag
gacaaggagcaggcgtgggccgcccagccgcagcgcccgccgcccttctccgtctcccag
ctctccctcatcgagatccggtgcgccacaccacgatgcaccttctacgtctccgtggac
acccagcctcactgccacgagtgcttcgagaagcgacaggccactaccggcggaggaatg
aggatagaaggggtcgtgcagaccnaagggggaggggtgcaaggtggtgtaggagtcatt
gggggatcggaggctgaggtgagctccagaggagcccgaggcagcagccccccgtcctcc
acatgtgggagagcggtggtgatatccagccctcgctctgcaccacccaccgctcccagc
ctcagcctgtacagtgaaactcacgccatgaagtgcaagacacccggctgcctcttcacc
cttagcgtgcagcacgatggactttgcgagcgctgcttcaactccaggcagaaccatgga
ccccccggagttggaaccgctgccccaggactcccgggccccaccggggggcctacagtc
ccccacccggcccagggcaccggctggacccagtgggggggccgcgagacagagacagag
acagagcgctgcagcatgtgcagacaggaggcgttcaggatattcaacggcctgtgtcca
ccctgcatgcagagacagcagactccagagaggggacagccgcagcagaacaaccccagg
accgaggcctcctcctcagcttggacccaggcccgggactcggagcggccgtgcctcacc
ataaccccgggacacacctcggcctggcaagcccctctggcccggccttgtaaaagatcc
ggctgccagttttttgggacgccagagaagctgggtttctgcactatttgctacgtagac
tatcagaccaaccaccacatgacccctcccgctgcaccggtccagagccggcatggtgtg
gaggccggcttccagaacgcctcccggtgtcgagggccggggtgtggtgcagttggcaag
gcgatgctggagggctactgcgacaagtgctacgtcaaagagcaaagcacacggctcaac
caagtagcaaatcgcnacaccccctcccctcctctggtcatgcgtgaacgagcagccaaa
cccagatcttcacagcaatcccagacccagacccagacccagactcagactcagtgccgg
cggagcggctgcagtaatgtgtccccgggttgcacagacctctgccccgagtgccacacg
cgtggccagggccgagaggcgggcagacgggcgcaggcgcccaaagaaaagtccaagcag
cggtgcaggacgcagggctgcgaccactacgccaaccaagagaaacagggctactgcaac
gagtgcgaccacttcaaacagatctatcgcggctga
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