Anoplopoma fimbria (sablefish): 129092469
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Entry
129092469 CDS
T09102
Symbol
cxcl12a
Name
(RefSeq) chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1)
KO
K10031
C-X-C motif chemokine 12
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04060
Cytokine-cytokine receptor interaction
afb04672
Intestinal immune network for IgA production
afb04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
129092469 (cxcl12a)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
129092469 (cxcl12a)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
129092469 (cxcl12a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
afb04052
]
129092469 (cxcl12a)
00536 Glycosaminoglycan binding proteins [BR:
afb00536
]
129092469 (cxcl12a)
Cytokines and neuropeptides [BR:
afb04052
]
Cytokines
Chemokines
129092469 (cxcl12a)
Glycosaminoglycan binding proteins [BR:
afb00536
]
Heparan sulfate / Heparin
Chemokines
129092469 (cxcl12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL8
Motif
Other DBs
NCBI-GeneID:
129092469
NCBI-ProteinID:
XP_054456406
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All DBs
Position
6:complement(14531546..14537775)
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AA seq
98 aa
AA seq
DB search
MDMKLFAVLAALTLMIYVPPSQAKPISLVERCYCRSTVNSLPRGYIRELRFIHTPNCPFQ
VIAKLKTNKEVCLNPEIPWLQQYLKNAIKKMKKSKRSN
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atggatatgaagctgtttgcagtcttggctgcgctcacgttgatgatatatgtgcctcca
tcacaagcaaagcccataagtctggtggagagatgctactgtcgttcaacagtcaacagc
ctcccacgaggctacatccgagagctcaggttcatccacacgccaaactgccccttccaa
gtgattgccaagctgaagacaaacaaagaggtgtgtctgaatccagaaatcccgtggctg
cagcagtacctgaagaacgccatcaaaaaaatgaagaaatccaaacggagcaactaa
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