Anoplopoma fimbria (sablefish): 129093196
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Entry
129093196 CDS
T09102
Symbol
rfng
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb00514
Other types of O-glycan biosynthesis
afb04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
129093196 (rfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
129093196 (rfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
afb01003
]
129093196 (rfng)
Enzymes [BR:
afb01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
129093196 (rfng)
Glycosyltransferases [BR:
afb01003
]
Glycan extension
O-Glycan
129093196 (rfng)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
129093196
NCBI-ProteinID:
XP_054457090
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All DBs
Position
7:8266756..8280530
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AA seq
390 aa
AA seq
DB search
MHIASVGVSKFCFLFSLAFCGLLLLLIPALQPPARQVDLPQPRPQVRPAQAGRSHRVRSP
GVSVHAGETDSDTELSSSSAGQTGATRNGIHSPKRGMDSKRGATPGGKGGRLSGSMSQDP
LDFKDIFIAVKTTRKYHKSRLELLVQTWVSRAKEQTYIFTDGEDKELQMRTGVNIINTNC
SAAHTRQALCCKMSVEYDKFIESQKKWFCHVDDDNYVILPSLLGLLSSYHHSKDVYLGRP
SLDHPIEAAERVKSDGSVSVKFWFATGGAGFCISRGLALKMSPWASLGNFISTAEKIRLP
DDCTIGYIIEALLEVTLTHTHLFHSHLENLQKLPTDTVLQQVTLSFGGFENRRNVVSIVG
GFSLADDPTRFKTVHCLLYPDTTWCPKFGH
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgcacatagcttcggtgggagtcagcaagttctgcttcctgttctccctcgccttctgc
ggccttctgctcctgctcatccccgccctccagcccccagcacgccaggtggacctgcca
cagccccgaccccaagtcagaccggcacaggccggccggtcacaccgtgtcaggtctcca
ggagtgtctgtccatgcaggggaaacagactctgacacagaactgagtagcagctcagcg
gggcagactggagctaccaggaatggtatccatagtcccaagagggggatggactccaaa
agaggagctacccctggaggaaagggtggtagactttcagggtctatgtcacaggacccg
ttagactttaaggacatttttattgcagtaaagactaccaggaagtaccacaagtccaga
ctggagctgctggttcagacctgggtttcccgagctaaagaacagacatacatatttact
gacggcgaggacaaggagctgcagatgagaacaggagtgaacatcatcaacactaattgc
tcagcagctcacacccgccaggctctgtgctgcaagatgtcagtggagtacgataaattc
atcgagtctcagaagaagtggttctgccacgtggatgatgataactacgtcatcctgccc
agcctgctggggctgctctcctcctaccaccacagcaaggatgtctacctgggccggccc
agtctggatcatcctatagaggctgcagagcgggtcaagagtgacggatcggtgtctgtc
aagttctggtttgccaccggtggagcaggtttctgcatcagcagaggcctggcactgaaa
atgagcccatgggccagtttggggaacttcatcagcacagcagagaagatccgactaccg
gacgactgcaccataggctacatcatcgaagcgctgctggaggtgaccctgacccacaca
cacctcttccactctcacctggagaaccttcagaagctgcccactgacactgtgctccag
caggtgactctgagctttggaggctttgagaacagaagaaacgtggtcagcattgttgga
ggcttttcactggctgatgaccccacaaggtttaagacggtgcactgccttctctatcca
gacactacgtggtgtccaaagtttggacattaa
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