KEGG   Anoplopoma fimbria (sablefish): 129093398
Entry
129093398         CDS       T09102                                 
Name
(RefSeq) F-box/WD repeat-containing protein 7-like
  KO
K10260  F-box and WD-40 domain protein 7
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:afb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    129093398
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:afb04131]
    129093398
   04121 Ubiquitin system [BR:afb04121]
    129093398
Membrane trafficking [BR:afb04131]
 Autophagy
  Mitophagy
   Other mitophagy associated  proteins
    129093398
Ubiquitin system [BR:afb04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     129093398
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_IFT122_1st Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR3_2nd EIF3I Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_WDR36-Utp21_2nd WDR55 DSE1_N Beta-prop_WDR75_1st Beta-prop_WDR41 Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_EML_2 WD40_MABP1-WDR62_2nd ANAPC4_WD40 F-box-like WDR90_beta-prop_4th NBCH_WD40 Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd Beta-prop_SPT8 PAC11 ASA1 Beta-prop_DCAF12 Beta-prop_Aladin Beta-prop_DCAF4 CFAP251_N F-box Beta-prop_ACSF4 Beta-prop_NOL10_N Beta-prop_VPS8 PQQ_2 Beta-prop_IFT140_1st TRM82_WD Beta-prop_WDR11_2nd Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 129093398
NCBI-ProteinID: XP_054457388
LinkDB
Position
7:1742833..1771159
AA seq 707 aa
MERQQRREEEEEEGRTGNALSTRREEEEEEEEETKEDAKEKLIDGHAPIPASSSLTSFPF
LSSSLCRGGGRGGGDEDGEEDEVRVAIVTIEDESCPSEPFGDAHLETANQIVRTCDGGDK
KKEGEEEEKEEREDEEEANSDEREEEEEENDKVTSPSLHLEIQMKRKLDHGPDGRPFPSG
KKHCKGNGYLSPASLVQATTPTTFGDLRLANGHSAQRRRVTSGPPPSGLQDWLHVFQAWS
GPERLLALDELIDRCETSQVKHMMQVIEPQFQRDFISLLPKELALYVLTFLAPRDLLQAA
QTCRYWRILAEDNLLWREKCREEGVSEYASCRRRKCVRSGVAVSPWKSAYIRQHRIENNW
RKGDTGEPMVLKGHDDHVITCLQFSGDLIVSGSDDNTLKVWSAITGKCLRTLSGHTGGVW
CSQMAVATVISGSTDRTLRVWDAESGECVHTLYGHTSTVRCMHLHGNRVVSGSRDTTLRV
WDASTGRCEHVLTGHVAAVRCVQYDGRRVVSGGYDYMVKVWDPETEACLHTLQGHTNRVY
SLQFDGAFVVSGSLDTSIRVWDAETGGCVHTLTGHQSLTSGMELRDNILVSGNADSTVRV
WDVRTGQCLHTLQGPNKHQSAVTCLQFCRGLVLSSSDDGTVKLWDLKTGAWLRDVVALQS
RGSGGVVWRIRASDTRLVCAAGSRNGTEETKLLVLDFDLDDGKTETE
NT seq 2124 nt   +upstreamnt  +downstreamnt
atggagcgtcaacaaaggagagaggaggaagaggaagagggaagaacagggaacgctctg
tcaacgaggagagaagaagaagaagaagaggaggaggagacgaaggaggacgccaaagaa
aaactgatcgacggacacgctccgatccccgcctcctcctccctcacctcctttcctttc
ctctcctcctcactgtgccgaggaggaggtagaggaggaggagacgaggacggcgaggaa
gacgaggtcagggttgccatagtgaccatcgaggacgagtcctgtccgtcggagcctttc
ggcgacgcccacctggagacggccaatcagatcgtacggacgtgtgatggaggagataaa
aagaaggaaggagaggaagaggagaaggaagagagggaggatgaggaggaggcaaacagt
gatgaaagagaggaggaagaggaggagaacgacaaggtgacgtcaccatcgcttcacctg
gagatccagatgaagaggaagttggatcacggtccagatggacgtccgtttccttcgggg
aagaagcactgcaaaggaaacggatacctcagtccggccagtctggttcaggccaccacg
ccgaccacgttcggtgacctccggttggccaacgggcactcggctcagcggcgccgcgtc
acctccggaccgccgccctccggcctgcaggactggctccatgtcttccaggcctggagc
ggtccagagaggctgctggctctggacgagttgatcgacaggtgtgagaccagccaggtg
aagcacatgatgcaggtgatcgagcctcagttccagagagacttcatctccctgctgccc
aaagagctggctctgtacgtgctgaccttcctggctcccagagacctgctgcaggccgct
cagacctgcaggtactggaggatcctggctgaggacaacctgctgtggagggagaagtgc
cgcgaggaaggtgtgtcagagtatgcgtcgtgtcgtcgcaggaagtgtgtgcgttcaggt
gtggcggtcagtccgtggaagtcggcctacatcagacagcaccgcatagagaacaactgg
aggaagggggacacgggagaacccatggtgctgaaaggtcacgacgatcacgtgatcacc
tgtctgcagttcagcggcgacctcatcgtcagcggctccgacgacaacacgctcaaggtc
tggtcggccatcaccggaaagtgcctgcggacgctgtcgggtcacaccggcggcgtgtgg
tgcagtcagatggccgtcgccacggtgatcagcggctccaccgaccggacgctgcgcgtg
tgggacgccgagagcggcgagtgtgtgcacacgctgtacggacacacgtccacggtgcga
tgcatgcatctccacggcaaccgggtggtctcgggctcccgggacacgacgctgcgcgtg
tgggacgcgtcgacgggccgctgtgaacacgtgctgacgggtcacgtggcggcggtgcgc
tgcgtgcagtacgacgggcgccgcgtggtgtcgggaggatacgactacatggtgaaggtg
tgggaccccgagacggaggcctgtctgcacacactgcagggacacaccaaccgggtgtac
tcactgcagtttgacggtgcgttcgtggtcagcgggtcgttggacacttcgatcagagtc
tgggacgcagagacaggtgggtgtgtccacacgctgacgggccaccaatcgctgaccagc
ggcatggagctgcgtgacaacatcctggtgtccgggaacgccgactcaacagtccgagtc
tgggacgtccggacgggacaatgtctccacacgctgcaaggtcccaacaaacaccagtcg
gcggtgacgtgtcttcagttctgcagaggtctggttctgtccagctccgacgacgggacg
gtcaaactctgggacctgaagaccggagcctggctgagagacgtggtggccctgcagagc
cggggatcaggtggcgtcgtttggcgaatcagagcgtccgacacgaggctggtttgcgcc
gccggcagcaggaacgggacggaggagaccaaactgttggtgctcgacttcgacctcgac
gacgggaagacggagacggagtga

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