Anoplopoma fimbria (sablefish): 129093634
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Entry
129093634 CDS
T09102
Symbol
nectin4a
Name
(RefSeq) nectin-4
KO
K06593
poliovirus receptor-related 4
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
afb04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
129093634 (nectin4a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
129093634 (nectin4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
afb04515
]
129093634 (nectin4a)
Cell adhesion molecules [BR:
afb04515
]
Immunoglobulin superfamily
Nectin family
129093634 (nectin4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
V-set
I-set
Ig_2
C2-set_2
ig
TMEM154
FAM176
Protocadherin
LST1
EphA2_TM
DUF7237
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
129093634
NCBI-ProteinID:
XP_054457682
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All DBs
Position
7:complement(13403733..13417449)
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AA seq
616 aa
AA seq
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MTPLPTRLFVCLCVLWILVTVIWGDFVDLPPNNPLLSLAEDETVLPCRYQPTGGTVVQVT
WYKEKPDATKDQIITAHHINGQTAFGTWSRRVHFKSSEPTVDSSLVIMSTEISDEGKYVC
RISTFPTGNFDREMSLIVWTVPISSLDPVILVEGQSYRQAGSCRSVARPPPRLSWDTDLN
GQSINRSSDNGAVSSSYALHPLRSMNGKKLDCLVWHPTMKVPRRLRNKLVVHFPPHAEVS
GYNGDWSVGLENAALRCVSGGNPKPQSFSWIRMGGELPEGVIPHPNGTLVFGRPLSLSDG
GIYQCVAKNDVGVGKAEVDIGVAESPEEPSMMENMLMIIVGGVAGGLLILMIIVIITVTC
HHKRKNNKLEKELTVRKEEISTLTRQASFRIVNSVSTDARGTTEENIPLRVEGTIRTSMS
SLGDHAHCRDSRSTISGGRGGGGAFDYLGRPVLHNNSRRGRDRPLDRDEENRLRVETYVR
NSAISLQETRFHPPLMPSAFPMVQSTDIVRQLNGSAIIPTDGGSRPGSVTKTHQHPPMSC
NYPPVTDDEDEVDEGLGGPASQEHPDDQDSETNSSQVSEVHSTRYRQTNGTLRPKPRPSP
TVVSPHASLIHKAQIV
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgacacctctgccgaccagactgtttgtgtgtctctgcgtcctctggatcttggttaca
gtgatatggggagactttgtggatctccctccaaacaatcccttactctccctggcagag
gatgagaccgtcctgccctgtcgctaccagccaactggtggcactgtggtgcaggtcacc
tggtataaggagaaacctgatgccaccaaggatcagatcatcactgcacaccatattaat
ggacagacagcgtttgggacatggtcacgacgtgtgcactttaaaagcagcgagcccacc
gtggactcctccctggtcatcatgagcacagagatctctgatgaggggaaatacgtctgc
cgcatcagcaccttcccaaccggaaactttgacagagagatgtcactcatcgtgtggacc
gttcctatctcctccctggacccagtgattctggtggagggacagtcctaccgacaggcc
ggttcctgtcgctctgttgcccgcccgcccccccgcctctcctgggacaccgacctgaat
ggccagtccatcaatcgttcctctgacaatggggcggtctcctcgagctacgccctgcac
cccctgaggagcatgaacggcaagaagctggactgtctggtgtggcatccgactatgaag
gtcccccgcaggctcagaaacaagctggtggtgcacttccctccacacgcagaggtgtct
ggctacaatggagactggtctgtgggtttggagaatgctgctctgaggtgtgtgagtgga
ggaaaccctaaaccacagagtttcagctggatcagaatggggggagagctgccggaaggt
gtcatcccccaccctaatggaacactagtttttgggcgaccactaagcttgtcagatgga
ggcatctaccagtgtgtggcgaagaatgacgtaggagtagggaaggcggaggtggatatt
ggtgtggcagaatctcccgaggagccgagcatgatggagaacatgctgatgatcatcgtg
gggggcgtggctggggggttgctgatcttgatgatcatcgtcatcatcaccgtcacttgt
catcacaaacgcaagaacaacaagctggagaaggagctcactgtgaggaaggaggaaata
agcactctcaccagacaagcttctttcaggatagtgaactctgtcagcacagatgccaga
ggaacgacagaggaaaacatccctctgagggtggagggaaccataaggaccagcatgtca
tccctcggggaccatgctcactgccgtgacagccgatctactatctcaggtggacgggga
ggagggggagcgtttgactacctgggccggccagtcctgcacaacaactcgcgacgggga
agagaccggcctctggacagagacgaggagaaccgactcagagtggagacatacgtgaga
aacagcgctatttctttacaggagactcgtttccaccctcctctcatgccatcggccttc
ccaatggtacagtccactgatattgtaagacagctgaacggcagcgccattatcccaacg
gatgggggttcacggccaggaagcgtcaccaagactcaccagcaccctcctatgagctgc
aactacccaccggtaacagatgacgaggatgaagtagatgaaggtttggggggtcccgcc
agtcaggagcatcctgatgaccaggacagcgagaccaacagctcccaggtgtccgaggtt
cacagtacacgctaccggcagactaatggcacactcagacccaaaccccggccaagcccc
actgtggtcagtccccatgcctccctgatccacaaggcccagatagtttag
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