Anoplopoma fimbria (sablefish): 129093834
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Entry
129093834 CDS
T09102
Symbol
trpc5a
Name
(RefSeq) LOW QUALITY PROTEIN: short transient receptor potential channel 5a
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
afb01009
]
129093834 (trpc5a)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afb04040
]
129093834 (trpc5a)
Protein phosphatases and associated proteins [BR:
afb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129093834 (trpc5a)
Ion channels [BR:
afb04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
129093834 (trpc5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_5
Ank_4
PKD_channel
YVC1_C
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
129093834
NCBI-ProteinID:
XP_054457932
LinkDB
All DBs
Position
7:complement(2350947..2410019)
Genome browser
AA seq
1044 aa
AA seq
DB search
MNPMTQLYYKKATYSPYRDRIPLQIVRAEVELSAEERAYLTAVEKGDYAGVKHALREAEV
YYNMDVNCLDPLGRSALLIAIENENLEIMELLLDHGIHTGDALLYAIRKEVVGAVELLLS
HRRPSGEKQVPSLMMDSQFSEFTPDITPIMLAAHTNNYEIIKLLVQRKVTIPRPHQIRCD
CVECVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEF
RQEYEELSQQCKRFAKDLLDQARSSRELETILNHRDNDQSEELDPRQCHDLAKLKLAIKY
HQKEFVAQPNCQQLLATLWYDGFPGWRRRHWAVKLVTCFIIGLLFPVFSLIYLLAPKSAL
GRFIKKPFIKFICHTASYLTFLFLLLLASQHIARTNLHMQGPPPTIVEWMILPWVVGFIW
AEIKEMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNSSRPREEWEMWHPTL
IAEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLN
QLYFYYETKASEEPNNCKGIRCERQNNAFSTLFETLQSLFWSIFGLLNLYVTNVKARHEF
TEFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGT
LPPPFNIIPSPKSILYLLVWLHNKLCRGGYGHGEDSHKCENLREFTERHADSLIQNQHYQ
EVIRSLVKRYVAAMIRSAKTDEGLTEENFKELKQDISSFRYEVLDLLGNRRPPRRHYSSS
SETARDDGAMASEDDSDRATAPDDERPSATLGVSALVRSISGITRLEGGDEGDEEELEEG
IGWGEEEEDEEGKPKSNGLKTAAVPPSSTDVLPSPSSSSSFSLTFSSSFARTRTRLQRLS
APGTKADSFKRLSYLFSRSKRRAPPMPLPLQSPPSYTISDGDVTRSETRLNEVGRSVDIS
NPSFSPRRTNGRDSLLTLPPPPCPCQSLHCASNMSESSSRLLDSSEDVFQGGGGGGAGEG
GVDGGGGWCSAGGWDPASRTAVRS
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccatgacacagttgtactacaagaaggcgacgtactcgccgtaccgcgacaga
atccctctccagatcgtgcgggcggaggtggagctgtctgcagaggagagggcttacctc
accgctgtagagaaaggcgactatgcgggggtcaaacacgccctccgtgaggcggaggtc
tactacaacatggacgtgaactgcctggacccgctgggccgcagcgcgctcctcatcgcc
atcgagaacgagaacctggagatcatggagctcctgctggaccacggcatccacaccggg
gacgcgctgctctacgccatcaggaaggaggtggtgggcgccgtggagctgctgctgtcg
caccggaggcccagcggcgagaagcaggttccctcgctgatgatggacagtcagttttca
gagttcaccccggacataactcccatcatgctcgctgctcacaccaacaactacgagatc
atcaagctcctggtccagaggaaggtcaccattcccagaccgcaccagatacgatgtgac
tgtgtggagtgcgtttccagttcagaggtcgacagtcttcggcattcaaggtcacgactc
aacatctacaaggctctggcctcgccctccctcatcgcactgtccagtgaagatcccatc
ctcactgccttcagactgggctgggaactcaaagaactcagcaaggtggagaacgagttt
cgtcaggagtacgaggagctgtcgcagcagtgcaagcgtttcgccaaagaccttctggac
caggccaggagttccagagagctggaaaccatcctgaaccacagggacaacgaccagagc
gaagagctggatccaaggcagtgccacgacctggccaagctcaaactggccatcaaatac
caccaaaaagagtttgtcgctcagccgaactgccagcagcttctggccacgctgtggtac
gacggcttcccgggctggaggagacgacactgggccgtcaaactggtcacatgcttcatc
atcggactcctgtttcctgtcttctcactgatctaccttctggctccaaagagcgctctg
ggtcgcttcatcaagaaacccttcatcaagttcatctgccacacggcgtcctacctgacc
ttcctcttcctgctgctgctggcctcgcagcacatcgcccgcaccaacctgcacatgcaa
ggacctccgcccaccatcgtggagtggatgatcctcccgtgggtggtggggttcatctgg
gccgagatcaaggagatgtgggacggtggattcacagagtacatccacgactggtggaac
ctgatggacttcgccatgaactcgctctacctggccaccatatcgctgaagatagtggcc
tatgtcaagtataactcctcccgacccagggaggagtgggagatgtggcacccgacgctg
atagccgaggctctgttcgccatcgccaacatcttcagctcgctcagactcatctccctc
ttcaccgccaactcccacctcgggcctctgcagatctcactggggaggatgctgctggac
atcctcaagttcctcttcatctactgtctggtcctgctggcgttcgctaatgggctgaac
cagctgtacttctactacgagaccaaggcctcagaggaaccaaacaactgcaagggcatc
cgctgtgagaggcagaacaacgccttctccacgttgttcgagaccctccagtcgttgttc
tggtccatcttcgggctgctgaacctctacgtcaccaacgtgaaggcccggcacgagttc
acggagttcgtcggggcgaccatgttcgggacgtacaacgtcatctctctggtggttctg
ctcaacatgctcatcgccatgatgaacaactcgtaccagctgatcgccgaccacgccgac
atcgagtggaagttcgcccgcaccaagctgtggatgagttactttgacgagggcggaacg
ctgccgccgccgttcaacatcatcccgagtcccaagtccatcctctacctgctggtgtgg
ctgcacaacaagctgtgcaggggaggctatgggcacggggaggactcgcacaagtgtgaa
aacctacgagagttcacggaacgccacgctgacagtctgattcagaatcagcattaccag
gaagtgatccggagcctggtgaagaggtacgtggcggccatgatacgcagcgccaagact
gacgagggactgacggaggagaactttaaggagttgaagcaggacatttcaagtttccgc
tacgaggtcctggatctcctcggcaaccggcgtcctccccgccgacactactcctcctcc
agtgagacggcgagagacgacggggccatggcctccgaggacgacagcgatcgggcgacg
gcgccggacgacgagaggccgtcggcgacgctcggggtgtccgctttggtgcgctccatt
tctgggataacccggctggaaggaggcgacgagggggacgaggaggaactggaggagggc
atcggatggggggaagaggaggaggacgaggaggggaaaccaaagagcaatgggctgaag
acggccgccgtccctccgtcctccacagacgtcctcccgtcgccgtcctcctcctcgtcc
ttctccttgacgttctcctcgtcgttcgcccgcacgaggacccgcctgcagcgcctctcg
gctccgggaacaaaggcagactccttcaagcgcctctcctacctgttctcgcgctccaaa
cgccgagccccgcccatgccgctgcccctccagtccccgccctcctacaccatctccgac
ggtgacgtgacccggagcgagacccgcctgaacgaggtgggccgctcggtcgacatcagc
aacccctcgttctcgccgcggaggacgaacgggcgggactcgctcctgacgctgcccccc
cctccgtgcccctgccaatccctgcactgtgcttccaacatgtccgagtccagctcgcgc
ctcctggactccagcgaggacgttttccagggcgggggcggcggaggagcgggcgagggc
ggcgtggacggaggagggggctggtgctcggcgggtgggtgggaccctgcgtcgaggaca
gctgtgaggtcatag
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integrated database retrieval system
