Anoplopoma fimbria (sablefish): 129094434
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Entry
129094434 CDS
T09102
Symbol
fyco1a
Name
(RefSeq) FYVE and coiled-coil domain-containing protein 1
KO
K21954
FYVE and coiled-coil domain-containing protein 1
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
129094434 (fyco1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129094434 (fyco1a)
Membrane trafficking [BR:
afb04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
129094434 (fyco1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
RUN
GOLD_2
PKcGMP_CC
Motif
Other DBs
NCBI-GeneID:
129094434
NCBI-ProteinID:
XP_054458582
LinkDB
All DBs
Position
8:21032186..21050126
Genome browser
AA seq
1513 aa
AA seq
DB search
MAAGATVGESQLQRIIRDLHEAVAELAKEYKESGEPITDDSTNLHKFSYKLEYLLQFDQK
EKTTFLGTKKDYWEYFTECLAKIKGANDGIRFVKSITELKTSMGKGRAFIRYSLVHQRLA
DTLQQCLMNQRVTSDWYYARSPFLKPHLSVDIINHLYELNEIQFDVASRGHDLDASWPTF
ARRTLGSANSPGHMWKAPSRSSSINSLASTYSQQAHEFPSSPDFGQGLLNDLNESLPVCN
EDVSTVEDLRLELDQSELKQRELLDKVRQLGEEADELRGVVVQLQSQLDVSLTAQEEQQG
LQGDLKALQGREEALSREVDALRIGEKAKEAEQQLLQEKLAAAEGKNIELMAKLDGVLNE
KGQQATSYFDSAQKIHELLDRLKEADRGKMEAVAEVEEKKRLAERLEDELRIKDAAAKQA
ETKLGALVTSVSEEKTKLEAKVEKQCGAIDKLQGDLTVREKEASNLQMQLQDLQRSLEEK
EKDVQEVKMKAHKDKDEMQKNASGLKESLEADVTALKEQLKRKEAEFTSSCKTLQQLEAK
NQSLIKERDKLTTNIVELEGNVKEQVMKTEEYKTQCGNLMELNKKLMTTAKRNEELKKEM
AENRTALEAELAALRASEKQLRGQLDDTKMTVDEKEKCLREENRKLDESLQRATMALKLS
ETTSKRLEHENQSVREEQETVKAALNRMQADLRSVNGQIGDLEKNLGSSRKNEARLQEQL
QAKEAQLEGKEKNLVELLSSLTSLEAREKELEIAKADAEATCAKQTELIERVTSDKRAME
KSQLERSAVQSKENQEVTGKLEGQLEVCMKEVSRLQAEILDLRVRAQRSEEERIKSQAQL
EVTEAQRDELRTLTEHLKAQTEALNQRHVAELMECKKKEEALIEQRDSEVAAHAELSISS
AAIREELSNLKAENRKLASENSETRDGLHRANTEMAELGMTICKLSAEKEEVTEHWAGDA
ARIEELKTEVERLEESLSELQLENTKLKEELTEKVKLPETIMALQEQLNKTRNQMQSVKD
SNREEVEATKFQMSSESMNHQVQMKSVNEQLDKMKAQLQEESKNVSSLRAKVSELEAVNE
KYLQLTGEKDALISKTETSICESESEIQQLRNAVTSAEEAHSALQKVCEDLKQKLDIEEA
DKQSQCLKMSAEIDDLNRTKVNLEERLIELIRDKDALWQKSDALEFEQRLRAEERWWLVD
KDATNCLGCQGQFTWWLRRHHCRLCGRIFCYYCSNNFVMTKHSGKKERCCRDCYTQHSVV
VERFTEAELSPSDVQPPPPGAGPQPPPEPAPYKPIPRVTVSEPSNRSEDGAYDIITEEEV
NGVYDSDTVSQTTGGSLEGEQDRPPPGALDIGTRDMTPDDPEEHVATVQDSEINLLKSGE
VTMAVPLTIEDISQFGDGSREIFIKSSCYSVITVAVGDCGPTISWMFSSEPKSISFSVVY
RESTDTHVEQSKVLIPLTRCNSSKETIQGQLKVRNPGLYTLIFDNSFSRFISKKVFYHLT
MERPIIYDGSDFP
NT seq
4542 nt
NT seq
+upstream
nt +downstream
nt
atggctgctggggctacagtcggggagagccaactccagaggattatccgagatctgcat
gaggctgttgcagagcttgcaaaggagtacaaggaaagtggggagccaatcacagatgac
agtaccaacctgcacaagttctcctacaaactggagtacctgctgcagtttgaccagaag
gagaagaccacatttcttggtacaaaaaaggattattgggaatacttcactgagtgtctg
gctaaaatcaaaggagccaatgatgggatccgctttgtcaaatccatcactgagctgaag
acatctatggggaaaggacgagcgttcatccgatactccctcgtacatcagcgactggct
gacaccctgcagcagtgcctgatgaaccagagagtcaccagtgactggtactatgcaaga
agccctttcttgaagccccaccttagtgttgacataatcaatcacctgtatgaactcaat
gagatccagtttgatgtggcctcccggggtcatgatcttgatgcttcctggcccaccttt
gcaaggagaacactgggaagtgccaactctcctggccacatgtggaaagcaccaagtcgc
agttccagtattaacagtctggccagcacctactcccagcaagcacatgagttcccctcc
agccctgactttggtcaaggtctgctcaatgacctgaacgagtctctgcctgtctgcaac
gaggatgtcagcacagttgaagatcttcgccttgagctagaccagtcagagctgaagcag
cgagagctcctagataaggtgcggcagctgggtgaggaggccgatgagctcaggggtgta
gtcgtgcaactccagagtcagctggatgtgtcccttaccgcccaagaggagcaacaaggc
ttgcagggagatctcaaagctctgcagggaagagaagaggccctgtccagagaggtggat
gcactcaggattggggaaaaagccaaggaggctgaacaacaactgctccaggaaaagttg
gcagctgctgaggggaagaacatagagctcatggccaagttggatggggttctgaatgag
aagggccagcaggcaaccagctactttgattcagctcagaagatacacgagttgctggac
agattaaaagaggcagatagaggaaagatggaagctgtagctgaggtagaggagaagaag
agactggcagaaaggctagaggatgagctgagaatcaaggatgcagctgcaaagcaagct
gaaacaaaactcggagctttagttacatccgtgtctgaggagaagaccaagttggaggcg
aaagtggagaaacagtgcggagccattgataagctgcagggggacctgacagtgagagag
aaggaggcgagcaacctccagatgcaactgcaggaccttcaaagatctctagaggagaag
gagaaagatgtgcaggaggtgaagatgaaggcacacaaagataaagatgaaatgcagaag
aatgctagtggtttaaaagagtctttagaagcagacgtcactgcccttaaggagcagcta
aagaggaaagaggcagagtttacctccagctgcaagacactacagcagctagaagccaaa
aaccaaagcctgatcaaagagagggacaaactgaccactaacattgttgagctggagggt
aacgtcaaagaacaagtcatgaagacagaagaatacaagacgcagtgcggcaatctaatg
gaattaaataagaaactgatgaccacggcgaagagaaacgaggagctgaagaaggagatg
gcggaaaaccgaacagcgcttgaagccgaattagctgctctaagagcttctgagaaacag
cttcgcggccagctggatgacaccaagatgacagtggatgaaaaagagaagtgcttgcgt
gaggagaaccgcaagctggatgagagtctgcagcgagccacgatggccttaaagctctct
gagaccacgtcaaagcggctggagcatgagaaccagagtgtgagagaggagcaggaaact
gtgaaagcagctcttaaccgcatgcaagccgacctgagaagtgttaacgggcagattgga
gatttggagaagaacttaggatcgtcacgcaagaacgaagcaagacttcaagaacagctt
caagccaaagaggcccagctagagggtaaagagaagaaccttgttgagctgctgtccagc
ctaacatctctagaggccagggagaaggagcttgagattgctaaagctgatgcagaggca
acttgcgctaaacagacagagttgattgaaagagttacctctgacaagcgggcgatggag
aaatctcagctggagaggagcgcagtccaatccaaagagaaccaggaagtgacaggcaaa
cttgaaggccaattggaggtgtgcatgaaagaagtgtcaaggctccaggcagagatcctg
gacctcagggtgcgggcacagaggtctgaggaggaaaggataaaatcacaagcgcagctg
gaggtgacggaggcccaaagagatgagctcaggactctgacggagcatcttaaagcccag
acagaggcgctgaatcaaaggcatgtagcggagcttatggagtgcaaaaagaaagaggag
gctctgattgaacagcgtgatagtgaagtagccgcccatgccgagttgtccatctcttcg
gctgccatccgagaagagctgtccaacctcaaggcagaaaatcgcaagctagcatcagag
aacagcgagacacgtgacggtctacacagggcaaacacagagatggcggagcttgggatg
acaatctgtaagctaagtgcagaaaaggaggaggttacagagcattgggcaggggatgcc
gccaggattgaagaactgaagacagaggtggagcgactggaagagagcctgtcagaacta
cagctggagaacaccaaactaaaagaagagctgacagagaaggtgaaactcccagagacc
atcatggcgctccaggagcagctgaacaagaccaggaaccaaatgcagagcgtcaaggac
tctaaccgagaggaggtggaggccaccaagttccaaatgagctcggagagcatgaatcat
caggtccagatgaagagtgtaaatgagcagctggacaagatgaaagcccagctgcaggag
gagtcgaagaatgtgtccagcttgcgggccaaagtgtctgaactagaggctgttaatgag
aagtacctgcagctaactggtgagaaagatgctctcatctcaaagacagaaacatccatt
tgtgagagtgagagcgagattcagcaactgagaaatgcagtaaccagtgctgaagaagcc
cactcggctctgcaaaaggtctgcgaggatttgaagcagaaacttgacatagaagaagct
gacaaacaaagccagtgcctgaagatgtctgcagagatcgatgacctcaacagaaccaag
gtcaacctcgaagagcggctcatcgagcttataagggacaaagatgctctttggcagaag
tcagacgctctggagtttgagcagagactacgagcagaggaacgctggtggttggtcgat
aaggatgccacgaactgcctcggctgccagggccagttcacctggtggctgcgcagacat
cactgcaggctttgtggtcgcatcttctgctactactgcagcaacaactttgtgatgacc
aagcacagtgggaagaaggagcgctgctgcagggactgttacactcagcacagcgtggtg
gtggagaggttcacagaggcagagctgagtccctcagacgttcagcctcctccacctgga
gctggacctcagccaccaccagaaccggccccgtataaacccattccaagggtaacagtt
tcagaacccagcaacagatctgaagatggagcttatgacataattacagaggaggaagtg
aacggcgtctacgacagtgacaccgtctcccagaccacaggtggctccctagagggagaa
caagacagaccgcctccaggagctctagatataggaacaagagatatgacccctgatgac
cctgaagagcatgttgccactgttcaggattcagaaatcaaccttctcaaatcaggagaa
gtcacaatggctgtccctctcaccattgaagacatttctcagtttggcgacggttccagg
gaaatttttatcaagtccagctgttacagtgtgataactgttgccgtgggtgactgcggg
ccaaccatcagctggatgttttcctcagaacctaagagcatctcctttagtgtggtctac
agggaatctactgacactcatgtggaacagtcaaaggtcctgattcctctgactcgctgc
aattccagtaaagagacaattcagggacagctgaaagtccgaaaccccggcctctacacg
ctcatctttgacaactccttctcacggtttatctccaagaaagtcttctaccatctgacc
atggagaggcccataatctatgatggaagcgactttccctga
DBGET
integrated database retrieval system
