Anoplopoma fimbria (sablefish): 129095679
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Entry
129095679 CDS
T09102
Symbol
smcr8b
Name
(RefSeq) guanine nucleotide exchange protein smcr8b
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129095679 (smcr8b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129095679 (smcr8b)
Membrane trafficking [BR:
afb04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
129095679 (smcr8b)
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Ortholog
Paralog
GFIT
Motif
Pfam:
SMCR8_C
Folliculin
Tad3
Motif
Other DBs
NCBI-GeneID:
129095679
NCBI-ProteinID:
XP_054460193
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All DBs
Position
9:complement(6884269..6893667)
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AA seq
902 aa
AA seq
DB search
MIGSPDLLAFTGTEGFGEGEEDQEGLPEDLSVPLLPPSNPWASSNQFHRDFILVAEFSEQ
VGPRPVHTIPDDPRVIGSFDLNHFSVRIMSVDYQASGPCQAPPASPGPRLNFSEDSKVVL
GDSAEDAFAYVHHVTLYDLEARGMVRPFCMAYVCSDQRKLMENFSELSTNFSKAADSLKT
GNRQAFSMELQRKLQELEYTRLTLLQETEPPMATNGFTEEGVKADELEAVDRSILHHRDL
LRQVTSYPNRKLKQPDFLPYDPADSLTDQISSPPPELRPPLSTSCRSERRLKSMEELCNE
YFLRLMKEQLADTERRLRGNRSVLRTARVIRSLSRRITLTNFLFEMWSPEDGDEEERESA
EAAPSKSAVEMFQSDPMSLESFCSCVEEIPIKLEAERAGTATPDPNVAMETGSVSSGDSI
EVLGTEKSYRTQHGSDSRETPVGMTDTSYRRAAVDSVVRSARTYAKRANSEDSIEVLSTT
ESIFPDDLTAITEEETEHQPLSNGFENEEETQTERKSEDFLKEEMTQNATTSVREDENKE
SAQDDDGRVDREDALKQTSVSGEVVMKKGKVIDCLKSIQIHEGNPPVKTSKLLQVEEAVE
STEVHQTMPSLPYLHVHFTPPVVPAEVDRWSPPAAPLRLLSIDEGSDCVSFTGSSDPQSL
TQTVHSSTRLDQRRRRKAGLRALRFLKQNSFSQHAVFCLLSGRPLVVVSGDESLVRKLVD
ALSLFLPAPGPDGNAVMLCLTAPLQLSDLLSWRLIGIHRSSSSLSAAILHSLTRYSRYLA
LLDLDQRTLRCPSYSGCLISRLANPHTGISRGLTYLLYLESCLTALTNQALLYTFTPAAQ
RPHTAGGSNGTEGKDLSCSSEYDLRVMHYLSDLIKQRHAGRGPPVLGFSYSSMHLHRNTY
AA
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgatcggctcaccggacctgctggccttcaccggcacagaggggttcggagaaggagag
gaggaccaggagggtctacctgaagatctctctgtcccccttctgcctccatccaacccc
tgggcctcctccaaccagttccacagggacttcatactggtggctgaattctcagagcag
gttggacccagacctgttcatacgataccggacgaccccagagtcatcggatcatttgac
ctcaaccacttctctgttcgcattatgtctgtggactaccaggcgtccggcccctgccag
gcccccccggcgtcccccggaccccgcctcaacttcagcgaggactccaaggtggtcctg
ggggactcggcggaggacgcgttcgcatacgtccaccacgtgaccctgtatgacctggag
gctcggggcatggtgcggcccttctgcatggcctacgtctgctccgaccagaggaagctg
atggagaacttctccgaactgtcgacgaacttctctaaggccgccgacagcctcaagacg
ggaaacagacaagcgttctctatggagctgcagagaaaactacaggagctcgagtacacc
aggttgactctgctgcaggagacagaacctccgatggcgaccaatgggttcacagaagag
ggagtaaaagcagatgagcttgaagctgtagatcgttcaatcttacatcatagagacctc
ctccgccaggtcacgtcctacccaaacaggaagctgaaacagcctgacttcctgccttac
gacccagccgactccctcactgatcagatctcgtcaccgcctcctgagctccgccccccc
ctctccacctcctgcaggtccgagcgccgcctgaagtctatggaggagctttgcaacgaa
tacttcctgagactgatgaaggagcagctcgctgacacggagcgccgcctgcgtggcaac
aggagcgtgctgcgaaccgctcgcgtcatacggtcgttgtccaggaggatcacgctcacc
aacttcctgttcgagatgtggagcccggaggacggcgatgaggaggagagagagagcgct
gaggcggcaccgagtaagagcgctgtggagatgtttcaatcagatcccatgagcctggag
tcattctgctcctgcgtggaggagatccccatcaaactggaggcagagagagctgggaca
gcgacccctgaccccaacgttgccatggagacaggaagcgtgagcagcggcgacagcatt
gaagtgctcgggactgagaagtcctaccggacacagcatggatctgacagcagagaaaca
cctgttgggatgacggacacctcttacaggcgagccgcggttgattcagtcgtcagaagc
gcgcggacgtacgccaaacgagccaacagcgaggacagcatcgaggtgctgagtaccacc
gagtccatcttccccgacgacctcaccgccatcacggaggaagaaacggagcatcaacct
ctgagtaacggctttgagaatgaggaggagacacagacggagcgtaaatctgaggatttc
ctcaaagaggagatgacacagaatgcaactacctcagtaagggaggatgaaaacaaagag
agcgctcaggacgatgacggccgtgttgacagagaggacgccttaaagcaaacaagtgtt
agtggtgaggttgtgatgaagaaggggaaggtcatcgattgtttgaagagcattcagatc
catgaaggcaaccctcctgtgaagacgtctaaactgctgcaagttgaagaagccgtggag
tcgactgaagtccatcagaccatgccgtcgctgccttaccttcatgtccacttcacccct
cccgtcgtcccggcggaggttgaccggtggtctccgcccgccgctcctctcaggctgctg
agcatcgacgaggggtccgactgcgtcagcttcaccggctcctcggacccgcagtctctc
acccaaaccgtccacagcagcacccgcttagatcagaggaggaggaggaaggcgggactc
agagccctcaggttcctcaaacagaactccttctcccagcatgccgtgttttgcctcctg
agcggtcggccgctggtcgtcgtcagcggagacgagagtttggtcaggaaactggtggac
gctctgagtctcttcctgcctgctcctggtcctgatgggaacgctgtgatgctgtgtttg
acggcgccgctccagctgagcgacctgctcagctggagactaataggaatacacagatct
tcctccagcttgtcggccgccattcttcactctctcactcgctacagtcgttatttggcg
ctgttggatctggaccagaggacgctgcgctgtccgtcatactccggctgtctcatcagc
agactggcgaatcctcacaccggcatcagccgaggactcacctacctgctgtacctggag
agctgcctgactgcactgaccaaccaggctctgctgtacacgtttactccggctgcacag
cgtccacacaccgctggagggagcaatggcacagaaggaaaggacttatcttgcagcagt
gagtatgatttgagagtgatgcattacctgagtgacctcatcaaacagcgccacgcagga
cgtggaccaccggttttaggattctcttacagctcgatgcacctgcacagaaatacatat
gcagcataa
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