KEGG   Anoplopoma fimbria (sablefish): 129096829
Entry
129096829         CDS       T09102                                 
Symbol
tpm3
Name
(RefSeq) tropomyosin alpha-3 chain isoform X1
  KO
K09290  tropomyosin 3
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb04260  Cardiac muscle contraction
afb04261  Adrenergic signaling in cardiomyocytes
afb04814  Motor proteins
afb04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:afb00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    129096829 (tpm3)
   04820 Cytoskeleton in muscle cells
    129096829 (tpm3)
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    129096829 (tpm3)
   04261 Adrenergic signaling in cardiomyocytes
    129096829 (tpm3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:afb04812]
    129096829 (tpm3)
Cytoskeleton proteins [BR:afb04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Tropomyosins
     129096829 (tpm3)
SSDB
Motif
Pfam: Tropomyosin Laminin_II CCDC39 CLZ TMF_DNA_bd Lebercilin FKBP15 DUF745 DUF3450 Sec2p CENP-F_leu_zip ATG16 PUMA_CC XhlA Rod_CreS Nucleoprot-TPR SlyX Laminin_I ERM_helical DUF16 HAUS1
Other DBs
NCBI-GeneID: 129096829
NCBI-ProteinID: XP_054461480
LinkDB
Position
10:complement(16142927..16158739)
AA seq 284 aa
MEAIKKKMLMLKLDKENALDQAEQAEADKKAAEDRSKQHEDEILQMQKKLKGTEDELDKY
SEALKDAQEKLEVADKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRAQKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIVEGELERTE
ERAELAEAKCAELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAE
FAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSM
NT seq 855 nt   +upstreamnt  +downstreamnt
atggaggccatcaaaaagaagatgctcatgctaaagttggacaaggagaatgcactggac
caggctgaacaagctgaagcagacaagaaagcagccgaagacagaagcaagcagcatgaa
gacgaaattctgcaaatgcaaaagaagctaaaggggacagaggatgagctggataaatac
tcggaggccctgaaggatgctcaggagaagcttgaggtggctgacaagaaggctgctgat
gctgaagcagaagtggcttccctgaacagacgtatccagctggtggaggaggagttggac
cgagctcaggagagactggcaacggctctgcagaagctggaggaggcggagaaggctgct
gatgagagcgagagaggtatgaaggtgattgagaacagggctcagaaggatgaagagaag
atggagcttcaggagattcagctcaaggaggccaaacacatcgcagaggaggctgaccgc
aagtatgaggaggtggctcgtaagctggtgattgttgaaggagagctggagcgaaccgag
gagagggcagagctggctgaggctaaatgtgctgagctggaggaggaactgaagaacgtc
accaataacttgaagtctctggaggcccaggctgagaagtactctcaaaaggaggacaag
tatgaggaagagataaagatcttgactgacaagctgaaagaggctgagacccgggccgag
tttgctgagagatctgtggcaaagcttgagaagaccattgatgatctggaagatgagctt
tatgcacagaaactcaagtacaaagccatcagcgaagaactggaccatgccctcaatgac
atgacatcaatgtaa

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