Anoplopoma fimbria (sablefish): 129096843
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Entry
129096843 CDS
T09102
Name
(RefSeq) polyhomeotic-like protein 1
KO
K11456
polyhomeotic-like protein 1
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
129096843
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afb03036
]
129096843
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
129096843
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-FCS_1
SAM_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
129096843
NCBI-ProteinID:
XP_054461496
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All DBs
Position
10:22090627..22104955
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AA seq
900 aa
AA seq
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METDGEQNQQGASTNGSTASGTSSRPSPMNSMSLYERQAVALQALQRQPNAAQYFQQLML
QQQISNAQFQNLAAVQQVKATLAASRQSSPSSSGSSQTTSTTAASVTSGSTTSSRPMGAP
ATSTISQSVLLSGTAGGQGQMYLRVNRSLRAPISSQLIFMPGNTAAATVATVTQQPQAQQ
QQQQEVTPTSSSGGHSDNDQVQNLAMRGVSGPKGVKTEAPERSDSAAYSLVQPSHQSISH
SSTKPNQHHHQPPHIKIPTYPQPTNLKAHPSSSSSSTSSTSSIPLSQLLLHGTRTLTTGS
TAPTAAHTLVLTSGAASQGHGYPVGTATIKPAVNAQTLVVQPLQKTSLGAEKSGHGNGPV
PIQPKTLQGLRLPLQLPSRNPPPILPAPPPVSSSSAQPAQPPHIPVQIVGARQSTLGNAQ
ALALARGSCCQDGAAAVLSSSSSLLTMVASIASREGGVVGRGVGLKTLQSPQEAPPLAQV
SQVHPQANQSTGPSQNGPVVSNPASSQATVVSSPPSSMSRSSLSLPLVTEEQRGASTAVT
TNGDSSRSQTAQVKQLTGSLKRKSDSTSANDEDGPSPPRLQPIRDHVSAVPTNPREAGPG
APPPVSSSPSPLLSVSRGVGQGERAPPPQAVVKPNVLTHLIEGFVIQEGAEPFPVCGSVK
DSTGEDLTNDSLDTNQSETVTTATVLKCEYCKNFAPASQFRGTKRFCSMTCAKSMYWFPR
YNVSFRQHFCVRQGQGQGQGQGHGQLSNSDEDGGITRRRVPRRTSSEIASAKIAGRPIPV
KCRSESSHSDEESSGEEDEDDPVSLSSASSASCRPPPPPLPTESSSPSCLPAGPAQWSVE
EVSQFISSLQGCEELASQFLSQEIDGQALLLLKEEHLMSTMNIKLGPALKICAHINTLRD
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atggagacggatggcgagcagaaccaacagggggcctcgaccaatgggagcactgcgtcc
gggacgagctcccgcccctctccgatgaattccatgtctctgtatgaaagacaggcggtg
gcgctgcaggcgttacagaggcagcccaatgcagctcagtacttccagcagctgatgctg
cagcagcagatcagcaacgcccagtttcagaacctggcagccgtgcaacaggtaaaggct
actctggcagccagtcgccagtcaagtccctccagcagcggctcttctcagaccaccagc
accacagctgccagtgtaacatctggatctacaaccagcagccgtcccatgggcgccccg
gcaacgtccaccatcagccaatcggtgctgctgagtgggacggcgggggggcagggacaa
atgtacctgagggtcaaccgctccctgagggcccccatctcctcgcagctcatcttcatg
cccggcaacacggcagccgctaccgtggcaaccgtcacccagcaaccacaggctcagcag
cagcaacaacaggaagtgacgccaacttcctcctccggcggccactcggataatgaccag
gtgcagaatcttgccatgcgaggtgtgtccggtcccaaaggtgttaagactgaagcccca
gagaggagtgactcagctgcttactccttagtccagccttcacaccagtccatctcccac
tcctccactaagccaaaccagcaccaccaccagccgccccacatcaaaatccccacctac
cctcagcccaccaacctcaaagcccacccttcctcctcctcctcctccacgtcctccacc
tcctccatccctctctcccagctcctgcttcacggcacccggactctcaccacgggatcc
acggcccccacagcggctcacactctggtcctgacgtccggcgcggcatcccaggggcac
gggtatcctgtcggcacggcgaccatcaaaccggcggtgaacgctcagacgctggtggtg
cagccgctgcagaagacgtcgctcggtgcagagaaatcgggccacgggaacggacccgtc
cccatccaacccaaaactctgcaggggctccgcctgccgctccagctgccctccaggaac
cctccacccatcctgcccgccccgccgcccgtcagcagctcctccgctcagcccgctcag
ccgccgcacatccccgtccagatcgtaggagcgagacagagcacgctggggaacgcccag
gctctggctctggcccggggcagctgctgccaggacggagccgccgccgtcctcagcagc
tcgtccagcctgctcaccatggtggcgtccatcgcgtccagggagggcggggtcgtgggc
cgcggggtggggctaaagacgctccagtcgccacaggaggcccccccgttggctcaggtc
tctcaggtgcacccgcaggccaatcaaagcaccgggccgagtcagaacggaccggtggtt
tctaaccccgcctcctcccaggccaccgtggtttcctcccctccctcatcgatgtctcgc
tcctccctctcgctccctctggtgacggaggagcagagaggagcgtcaacggctgtgacc
accaacggagactcatccagaagtcagacagcacaggtaaaacagttgaccggctcacta
aaaagaaaatcagactctacttcagccaacgatgaagacggcccctcccctccacggctc
cagccaatcagagatcacgtctcagccgtgccgaccaatcccagggaagcaggccctggt
gctcctcctcccgtctcctcctctccctcccccctgctgtcagtgtcccgtggggttggc
cagggggagagagctcctccccctcaagctgtggtgaaacccaacgtcctcacacacctc
atcgagggcttcgtcatccaggagggggcagagcctttccctgtttgtggttcagtaaag
gactcgactggtgaggatttaaccaacgacagtctggacaccaaccaatcagagacggtt
acaacagcgacagtgctgaagtgtgagtactgtaaaaactttgctccagccagccagttc
agaggcaccaaaaggttctgctccatgacgtgtgccaagagtatgtattggttccccagg
tacaacgtcagcttcaggcagcacttctgcgtgcggcagggtcaaggtcaaggtcaaggt
cagggtcacggtcagctctccaactcagacgaggacggaggaatcacccggcggagggtc
ccgcgacggaccagctcagagatagccagtgccaagatagcagggagacccatacctgtc
aagtgccgttcagagtccagccattcagacgaggagtccagcggagaggaggatgaagac
gaccccgtgtccctgtcgtccgcctcctccgcctcctgccgcccgccgcctcctccgctc
ccgacggagagctcctcccccagctgcctccctgctggccccgcccagtggagcgtggag
gaagtgtcgcagttcatttcctcactacaaggctgtgaggagctcgcctcccagttcctg
tctcaggagattgacggacaggccctgctgctgctgaaggaggagcatctcatgtccacc
atgaacatcaagctaggccccgccctcaagatctgcgcccacattaacaccctgagagac
tga
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