Anoplopoma fimbria (sablefish): 129097306
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Entry
129097306 CDS
T09102
Symbol
ext1b
Name
(RefSeq) exostosin-1b
KO
K02366
glucuronyl/N-acetylglucosaminyl transferase EXT1 [EC:
2.4.1.224
2.4.1.225
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
afb01100
Metabolic pathways
Module
afb_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
129097306 (ext1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
afb01003
]
129097306 (ext1b)
Enzymes [BR:
afb01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
129097306 (ext1b)
2.4.1.225 N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase
129097306 (ext1b)
Glycosyltransferases [BR:
afb01003
]
Glycan extension
O-Glycan
129097306 (ext1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin_GT47
RXYLT1_C
Motif
Other DBs
NCBI-GeneID:
129097306
NCBI-ProteinID:
XP_054462095
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Position
10:complement(9729404..9846204)
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AA seq
740 aa
AA seq
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MQAKKRYLILLSAGACLVLLFCLGGVQLPAASRSRHDRGRNGYRPEQPWPHFSDPLHLFL
PWDQTDTEEYNLHISPRQKRDVNTSVYRGKRCRVDSCFDFAPCQRNGFKVYVYPQQKGEK
ISESYQNILSTIEASRFYTSDPGQACLFILSLDTLDRDQLSPQYVHNLKTKVQNLPLWND
GRNHLIFNLYSGTWPDYTEDLGFDIGQAMLAKASISTENFRPNFDVSIPLFSKEHLRTGG
ERGFLKYNSIPPFRKYMLVFKGKRYLTGIGSDTRNALHHVHNAEDVVLLTTCKHGKDWQK
HKDARCDRDNAEYDKYDYKEMLHNSTFCLVPRGRRLGSFRFLEALQAACVPVMLSNGWEL
PFSEIIDWNTAAVIGDERLLLQIPTTVRSIHQDKILSLRQQTQFLWEAYFSSVEKIVLTT
LEIIQDRVLEHSSRSSLMWNSHPGGLFALPQYSGYLGDFPFYYATLGIKPYPKFTAVIHA
VSPLVSQSQPILKLLVAVAKSQYCAQIIVLWNCDKPLPAKHRWPATSVPVIVIEGENKVM
SSRFLPYETIVTDAVLSLDEDTVLSTTEVDFAFTVWQSFPERIVGYPARSHFWDSNKERW
GYTSKWTNDYSMVLTGAAIYHRYYHHLYTNYLPTSLKGMVDQLANCEDILMNFLVSAVTK
LPPIKVTQKKQYKETMMGQSSRASRWADPDHFAQRQTCMNKFASWFGAMPLVHSQMRLDP
VLFKDQVSILRKKYRDIERL
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccaaaaaacgctacctgatcctgctctccgccggcgcatgtctggtgctcctc
ttttgcctcggaggagttcaacttccagcggcgagcaggagccggcatgaccgcggccgg
aacgggtaccggcccgagcagccctggccgcacttctcggacccgttacaccttttcctg
ccctgggatcagacggacaccgaggagtacaacctgcacatatccccgaggcagaagagg
gacgtcaacacgagtgtttacagaggcaagcggtgccgcgtggactcctgcttcgacttc
gctccgtgccagaggaacgggttcaaagtgtacgtctacccgcagcagaagggggagaag
atctccgagagttatcagaatattttatccaccatcgaggcgtccaggttttacacctcg
gacccgggacaagcgtgtctgttcatcctgagtctggacactctggaccgggaccagctg
tccccgcaatacgtccacaacctgaagaccaaggtgcagaacctgcccctgtggaacgac
ggccggaaccacctcatatttaacctgtactcggggacgtggccggactacacggaagac
ttgggcttcgacatcggccaggccatgttggccaaggccagcatcagcaccgagaacttc
cggcccaacttcgacgtgtccatcccgctcttctccaaggaacacctgaggaccggcggg
gagcggggcttcctcaagtacaactccatcccgcccttccgaaagtacatgctggtgttc
aaggggaagcgctacctgacgggcatcggctcggacacccggaatgccttgcaccatgtg
cacaacgcggaggacgtggtgctgctcaccacctgcaagcacggcaaggactggcagaag
cacaaggacgcgcgctgtgacagggacaacgcggagtacgacaagtacgactacaaggag
atgctccacaactccaccttctgtttggtgccccgcggcagacgcctgggctcctttcgc
ttcctcgaggcgctgcaggctgcgtgtgtgccggtcatgctgagtaacggttgggagctg
cctttctccgagatcatcgactggaacacagccgcagtgatcggcgacgagaggctcctg
ctgcagatcccgaccacggtgcgctccatccaccaggataagatcctgtccctcagacag
cagactcagttcctctgggaggcctacttctcctccgtggaaaagatagtactgactaca
ctggagatcatccaggaccgcgtgttggagcatagctccaggagcagcctgatgtggaac
agtcaccctggggggcttttcgccctgccccagtactctggatacctgggagacttcccc
ttctactatgccacactgggtatcaaaccctacccaaagttcacagcggtcatccatgcc
gtctcgcctctggtgtcccagtcccagcccatactcaagctcctggtagctgtggccaag
tcccagtactgtgcacagatcattgtcctgtggaactgtgacaagcctcttccagccaag
caccgctggcccgccacctcagtgcccgtcatcgtcatagagggagagaataaggtgatg
agcagtcgttttctgccctatgagaccatagtgactgacgctgtcctcagcctggatgaa
gacacagtgttgtccaccacagaggtggattttgccttcacggtttggcagagttttcct
gagcggatcgttggttaccctgctcgcagccacttctgggacagcaacaaggagcgttgg
ggctacacatccaaatggaccaacgattattcaatggtgctgacgggggccgccatctac
cacaggtattaccatcacctgtacaccaactacttacccactagtctgaagggcatggtg
gaccagctggccaactgtgaggacatactgatgaacttcctggtctctgctgtcaccaag
ctgccgcccatcaaggtcacacagaagaaacagtacaaggagaccatgatgggacagtct
tcaagagcttctcgctgggccgatccggaccactttgcccagcggcaaacctgcatgaac
aagttcgccagctggtttggcgccatgccgctggtccactcccagatgagactggacccc
gtcctgttcaaggaccaggtctccattctccgcaagaaatacagggacatcgagaggctc
tga
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