Anoplopoma fimbria (sablefish): 129097327
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Entry
129097327 CDS
T09102
Name
(RefSeq) LOW QUALITY PROTEIN: H-2 class I histocompatibility antigen, Q9 alpha chain-like
KO
K06751
MHC class I antigen
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04144
Endocytosis
afb04145
Phagosome
afb04218
Cellular senescence
afb04514
Cell adhesion molecules
afb05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
129097327
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129097327
04145 Phagosome
129097327
09143 Cell growth and death
04218 Cellular senescence
129097327
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129097327
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
afb04147
]
129097327
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
afb00537
]
129097327
Exosome [BR:
afb04147
]
Exosomal proteins
Proteins found in most exosomes
129097327
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
afb00537
]
Antigens
129097327
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
Ig_3
ETRAMP
TMEM154
DUF7248
DUF5325
DUF6377
CD1107-like
GAPT
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
129097327
NCBI-ProteinID:
XP_054462123
LinkDB
All DBs
Position
10:13740565..13749694
Genome browser
AA seq
357 aa
AA seq
DB search
MEPKTVTLLMIISLHGATAVTHSLKYFYTASSGVPNFPEFVAVGLVDEXQMVHYDSNTRR
AEPKQDWMSKATEDDPTYWQGQTXKLLGSQQTFKANIETAKQRFNQTGGVHINQRMYGCD
WDDETDEVKGYFQDGYDGEDFISFDQKTETWIAPKPQAVITKHKWDNNRAEIAQEKNYLT
QICPEWLKKYVNHGRSSLMRTERPSVSLLQKTPSSPVSCHATGFYPDRASLFWRREGEEL
HEDVDHGEILPNQDGSFQMSVDLKLPSVPAGDWGRYECVFQLSGVTEDIVTRLDKAVIRT
NQENTSMTIIIIIAVAVLALVLIAGVGFMAYKKKKAKCPPPSDNSSELSKRLNPDSE
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggagccgaagactgtgactctcctgatgataataagccttcatggagcgacggcagtg
actcactctctgaagtatttctacactgcgtcctctggagtcccaaacttcccagagttt
gtggctgttgggttggttgatgaanttcagatggttcactatgacagtaacaccaggaga
gcagaacccaaacaggactggatgagcaaagccacagaagatgatcctacgtactggcag
gggcagactnngaaacttttgggctcccagcagaccttcaaagccaacattgaaacagca
aaacagcgcttcaaccagactggaggtgtccacattaaccagaggatgtacggctgtgat
tgggatgatgagaccgatgaggtcaaaggttattttcaagatggttatgatggagaagac
ttcatatcatttgaccagaagacagagacatggatcgctcccaaaccacaggctgtcatc
accaaacacaagtgggataataacagagctgagatagcacaggaaaagaactacctgact
cagatttgtcctgagtggctgaagaagtatgtgaaccacgggaggagctctctgatgaga
acagagcgtccctcagtgtctctcctccagaagactccctcctctccagtcagctgccac
gctacaggtttctaccctgacagagcttcactgttctggaggagagaaggagaggagctc
catgaggacgtggaccacggagagatcctccccaaccaggatggatccttccagatgagc
gttgacctgaaacttccatcagtcccagctggagactgggggaggtacgagtgtgtgttt
cagctgtctggtgtgacggaggacatcgtcaccagactggacaaagctgtgatcaggacc
aaccaagagaacacttccatgaccatcatcatcatcattgcagtggctgttcttgctctc
gtcctcatcgctggtgttggattcatggcttacaaaaagaagaaagccaaatgccctccg
ccttctgacaacagctctgagctctctaaaagactgaatcctgactctgaatga
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