KEGG   Anoplopoma fimbria (sablefish): 129097347
Entry
129097347         CDS       T09102                                 
Symbol
tnfa
Name
(RefSeq) tumor necrosis factor a (TNF superfamily, member 2)
  KO
K03156  tumor necrosis factor superfamily, member 2
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb04010  MAPK signaling pathway
afb04060  Cytokine-cytokine receptor interaction
afb04150  mTOR signaling pathway
afb04210  Apoptosis
afb04217  Necroptosis
afb04350  TGF-beta signaling pathway
afb04620  Toll-like receptor signaling pathway
afb04621  NOD-like receptor signaling pathway
afb04622  RIG-I-like receptor signaling pathway
afb04625  C-type lectin receptor signaling pathway
afb04920  Adipocytokine signaling pathway
afb05132  Salmonella infection
afb05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:afb00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    129097347 (tnfa)
   04350 TGF-beta signaling pathway
    129097347 (tnfa)
   04150 mTOR signaling pathway
    129097347 (tnfa)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    129097347 (tnfa)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    129097347 (tnfa)
   04217 Necroptosis
    129097347 (tnfa)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    129097347 (tnfa)
   04621 NOD-like receptor signaling pathway
    129097347 (tnfa)
   04622 RIG-I-like receptor signaling pathway
    129097347 (tnfa)
   04625 C-type lectin receptor signaling pathway
    129097347 (tnfa)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    129097347 (tnfa)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    129097347 (tnfa)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    129097347 (tnfa)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:afb04052]
    129097347 (tnfa)
   00536 Glycosaminoglycan binding proteins [BR:afb00536]
    129097347 (tnfa)
Cytokines and neuropeptides [BR:afb04052]
 Cytokines
  Tumor necrosis fators
   129097347 (tnfa)
Glycosaminoglycan binding proteins [BR:afb00536]
 Heparan sulfate / Heparin
  Cytokines
   129097347 (tnfa)
SSDB
Motif
Pfam: TNF
Other DBs
NCBI-GeneID: 129097347
NCBI-ProteinID: XP_054462153
LinkDB
Position
10:15324274..15326198
AA seq 238 aa
MEGECKVLLDTTVHTEARRKILQVKPGSKLTTALLVFTLCLAATAAAAVLVFHRHAKGPG
QDEDNFDLRRTLRQISNVRAAIHLEGHYNPAVKTSPEWKNEVDHYHSQGGLVLKNNEIVI
PQKGLYFVYSQASFRVNCSSSDTDDATSQPIVHVSHTVKRWSSSLGDKKQTILHSIRSVC
QMKASRNPDEEGSWFSSVYMGAVFNLMNGDILSTVMEEEMLPDLEDEWGKTFFGVFAL
NT seq 717 nt   +upstreamnt  +downstreamnt
atggaaggtgaatgcaaggtactactggacaccactgtccacacagaagccaggagaaaa
atattgcaagtcaaacccggctcaaagctaaccacagccctgctggtgttcacactctgc
ctcgcggctactgctgctgctgctgtcctcgtcttccacaggcatgccaagggcccagga
caagatgaagacaattttgatcttcgccgcacattgaggcagatttcaaatgtaagagca
gccattcatttagaaggacactacaaccctgctgtgaaaacctcacctgaatggaagaat
gaggtggaccattaccactctcaaggagggctggtactcaaaaacaacgaaattgttatt
cctcaaaaaggcctctactttgtttacagccaagcgtcgttcagggtcaattgcagcagc
agcgatactgatgacgccacctcacagcccattgtccacgtgagtcacactgtgaagcgc
tggtcaagttcgttaggggataagaaacagaccatcctgcactccatccgcagtgtctgc
caaatgaaagccagccgcaatccagatgaggaggggagctggttctcctctgtgtacatg
ggagcagtgttcaacctgatgaatggggacatactaagcacggtgatggaagaggaaatg
ctgcccgacctagaggatgaatggggaaagacattcttcggagtgtttgctttgtga

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