Anoplopoma fimbria (sablefish): 129098334
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Entry
129098334 CDS
T09102
Symbol
lfng
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb00514
Other types of O-glycan biosynthesis
afb04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
129098334 (lfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
129098334 (lfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
afb01003
]
129098334 (lfng)
Enzymes [BR:
afb01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
129098334 (lfng)
Glycosyltransferases [BR:
afb01003
]
Glycan extension
O-Glycan
129098334 (lfng)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
129098334
NCBI-ProteinID:
XP_054463307
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All DBs
Position
11:complement(5090431..5097644)
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AA seq
379 aa
AA seq
DB search
MLINNNKKTAISVGITACLCLLLLLLVVQHHRVQVDGDAAGGGGGGGGGGGEPGTRSLLQ
DAAQEEQRDPQTKKGFSAYFTKLTRGRREVEKPASSSGSAADAPPAEDIGANDIFIAVKT
TKKFHQSRLNLLLDTWISRNMQQTYIFTDGEDEELKKKIGSHAINTNCSAAHSRQALSCK
MAVEYDKFIESGKKWFCHVDDDNYVNVRTLVKHLSQYSHTQDMYIGKPSLDRPIEATERL
GDNKMKPVNFWFATGGAGFCVSRGLALKMSPWASGGHFMNTAEKIRLPDDCTVGYIIESV
LGVPLTRSNLFHSHLENLQQVSRSEIHKQITLSYGMFENKSNIINYKGAFPVEEDPSRFR
SVHCLLYPDTPWCPPQVAF
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgttgataaataataacaagaagacagccatctctgtgggcatcacagcgtgcctctgc
ctgctgctgctgctgctggtggtgcagcatcaccgcgtccaggtggatggagacgcagct
ggaggaggaggaggaggaggaggaggaggaggagagccggggacgcgctctctgctccag
gatgccgcgcaggaggagcagagggacccgcaaaccaagaagggattctctgcgtacttc
accaaactgacccggggacgcagggaggtggagaagcctgcgagctcctccgggtccgcc
gccgacgcgcctccagccgaggacatcggagccaatgacatcttcatcgcagtgaagacc
accaagaagttccatcagtccagactcaacctgctgctggacacgtggatctcaagaaac
atgcaacagacgtacatcttcacagacggagaggatgaggagctgaaaaagaaaattggg
agtcacgcaatcaacacaaactgctctgcagctcacagcagacaagctctttcgtgcaag
atggcggtggaatatgacaagttcatagagtcggggaaaaagtggttctgtcacgtagat
gacgacaactacgtgaatgttcggactctggtgaagcacctgtcccagtactcccacacc
caggacatgtacatcggtaaacccagtctggaccggcccatcgaggccacagagaggctg
ggggacaataagatgaaaccagtcaacttctggtttgctaccggaggagcaggcttctgt
gtgagccgaggtctggcgctgaagatgagcccgtgggccagcggcggccacttcatgaac
acagcggagaagatccgtctgcccgacgactgcaccgtcggctacatcatcgagtcggtt
ctgggggttcctctgacccgcagcaacctgtttcactcccacctggagaacctccaacaa
gtgtccagatctgagatacacaagcagatcaccctaagttatggaatgtttgaaaacaag
agtaatatcatcaattacaaaggggcttttcctgtggaggaggatccatcaaggttcagg
tctgtgcactgtctcctgtacccagacaccccctggtgtccccctcaggttgccttttag
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