Anoplopoma fimbria (sablefish): 129098582
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Entry
129098582 CDS
T09102
Symbol
pdgfab
Name
(RefSeq) platelet-derived growth factor alpha polypeptide b
KO
K04359
platelet-derived growth factor subunit A
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04010
MAPK signaling pathway
afb04020
Calcium signaling pathway
afb04510
Focal adhesion
afb04540
Gap junction
afb04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129098582 (pdgfab)
04020 Calcium signaling pathway
129098582 (pdgfab)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129098582 (pdgfab)
04540 Gap junction
129098582 (pdgfab)
09142 Cell motility
04810 Regulation of actin cytoskeleton
129098582 (pdgfab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
afb04052
]
129098582 (pdgfab)
00536 Glycosaminoglycan binding proteins [BR:
afb00536
]
129098582 (pdgfab)
Cytokines and neuropeptides [BR:
afb04052
]
Cytokines
Growth factors (RTK binding)
129098582 (pdgfab)
Glycosaminoglycan binding proteins [BR:
afb00536
]
Heparan sulfate / Heparin
Growth factors/receptors
129098582 (pdgfab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF_N
PDGF
Motif
Other DBs
NCBI-GeneID:
129098582
NCBI-ProteinID:
XP_054463604
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All DBs
Position
11:complement(10550750..10571148)
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AA seq
209 aa
AA seq
DB search
MRAALCYFLLWTTYLLLATSEEVEFPQELIDRLSHSEIHSISDLQRLLDIDSVGAGNNVI
EEPKHHKNNNHHKNYSRHHRYYNDLKSSQLHSRRKRSIAEEAVPAVCKTRTVIYEIPRSQ
VDPTSANFLIWPPCVEVKRCTGCCNTSNMRCHPSRKHHRTVKVAKVEYVKRRPKLKEVFV
RLEDHLECVCASQHQHVVEHSDAETVDVR
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgagagccgcactgtgttacttcctgctttggacgacgtacctgctgctggccacctct
gaggaagtggagtttccccaggagctgatagacagactctcccacagtgaaatccacagc
atcagcgacctccagcggctactggacattgactccgtaggtgcgggaaacaatgttatt
gaggagccaaagcaccacaagaacaacaaccaccataagaactactcccgtcatcaccgc
tactacaatgacctgaagagctcccagctccacagccgacgcaagaggagcattgcagag
gaggcggtcccggcggtgtgtaagacgcggacggtgatctacgagatccccaggagccag
gtggatccaacgtctgccaacttcctgatatggccgccctgtgtggaggtgaagcgctgc
acgggctgctgcaacacgagcaacatgcgctgtcacccttcccgaaagcaccatcgcacc
gttaaggtagcaaaggtggagtacgtgaagaggagacccaagctgaaagaggtctttgtg
cggttagaagaccacctggagtgtgtgtgtgcatcgcaacatcaacatgtggtggagcac
tcagatgcagaaacagtggacgtgaggtga
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