Anoplopoma fimbria (sablefish): 129099158
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Entry
129099158 CDS
T09102
Symbol
smcr8a
Name
(RefSeq) guanine nucleotide exchange protein smcr8a
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129099158 (smcr8a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129099158 (smcr8a)
Membrane trafficking [BR:
afb04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
129099158 (smcr8a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Folliculin
Motif
Other DBs
NCBI-GeneID:
129099158
NCBI-ProteinID:
XP_054464314
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All DBs
Position
11:23721508..23728684
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AA seq
946 aa
AA seq
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MIGSPDVVAFTKEDEYGQTTPDPWSLPEEFSVPLHPLADSNPWAKTSYAKFTKDFILISE
FSEQVGPQPLLTIPDEPKVCGTFDLNYFSLRIMSVDYQASFVGHPPGTGYPRLSFVEDSR
VVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYVSADERKIMLQFQELSLRFSQASEC
LKAGNRRAFAKELQRKLRDLEYTHSVLQREEGLQREAGPQCMYSAHAVEKANELANVEKS
IYEHRDLLRQISSYHHRPRRDPQAVSCQKCVTECLSECEQLLEKYAKLAKPFSYTDTREK
REEGQGQVDDKGGGGEADEEEDEGVKRRPSYTPQLIKAKSAKCFDKRLKTLQELCEVSFY
EATVALLKETERSFRGDLCYLYTRRLDRALRRKQRVTNFLFEEDLGDDDEDEGGTLRPFC
AVNHAVDNLTFLNPPPIVLGPEPLELDALEVPDPLDPASETSHTQESELGLVESHLESSP
SDQTLETQGSSEETKGSFSSDKSGTGPAERQQNPACMKSEAPDPDSDLTPDPDHNTDLDR
ESSSEEMETTAGEDEGDGTPVSLLEVVSELEASREDECDGVTDGACERQSDLLVPLDTAC
CMSQDGFLYEASAPEVVPRLGQSSHQQPCEPPVVNQEPQALLHLQDDYAVGSPGSESPAA
GLELPVGLLGDAVSRTSVEDGSDCTMSASMGSDRGASPLGYGGVVTLRQRKKAGQGALRF
VRQYPFALQALWCLLSGRTLVVLGADEGIVRRLVAALALFVPNPGKCGERVQAWLSCPFT
LTDLQRWKLVGLQRVASPVGSSMLYSLSRYSRYISILDADQKTLRCPPYRGQLLANIADH
RTYIRRGSTYFLHLQSTLCHLAARAFLFTFTHHLHLPVSSTEGPEVVEGRRLCFLQEQLG
LGEEDSQILLYLSQLITQQYLQPASGSRAAPTCFSFNYTTSVLYKI
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgataggctcacctgacgtggtggcgttcactaaagaggacgaatatgggcagacaact
cccgacccctggtctctccctgaggagttctctgttcctctccatccactggccgactca
aacccctgggccaagacgtcctacgccaagttcaccaaagacttcatcctcatctctgag
ttctctgagcaggtgggccctcagcctctcctcaccatcccagacgagcccaaagtctgc
ggcaccttcgatctcaactacttctccctgcgcatcatgtcggtggactaccaggcctct
tttgtgggacatccacccggcactggctaccctaggctcagttttgtggaggactcgagg
gtggtgctgggtgactcaaaggagggggcgttcgcctacgtccatcaccttaccctttac
gacctggaggcgaggggcttcgtgcgacccttctgtatggcgtacgtgtcggcagacgaa
aggaaaatcatgctgcagtttcaggagctgtctctccgcttctcacaggcctctgagtgt
ctgaaggctgggaacaggagagcgtttgccaaggaactccagaggaagctccgagacctg
gagtacactcactccgtgctgcagcgggaggagggcctgcagagagaggcggggcctcag
tgcatgtactccgctcacgctgtagagaaggccaacgagctggcaaacgtggaaaagagc
atctatgaacacagagacctgctgagacagatcagctcctaccatcaccgtccacgcaga
gaccctcaagctgtcagctgccagaagtgtgtcaccgaatgcttgagtgagtgtgagcag
ctgctggaaaaatacgccaagctcgccaaacccttcagttacaccgacacacgggagaag
agggaggaagggcagggtcaggttgacgataaaggaggtggtggagaagcagacgaagag
gaagacgagggcgtgaagcgcaggccgtcctacacgccgcagttgatcaaagctaagtct
gcaaagtgctttgacaagcgcctgaagactctgcaggagctgtgtgaggtttctttctac
gaggccaccgtggcgctcttgaaggagacggagaggagtttccggggcgacctgtgttac
ctgtacacacgccgcctggacagggcgctgcgcaggaaacagagagttaccaacttcctg
tttgaggaggaccttggagatgatgatgaggatgaagggggaacactaagaccattctgt
gctgtgaaccatgctgtagataacttaacattcttaaatccacctcctattgtgctagga
ccagaacctctagagcttgatgctctggaggttccagatcctctagacccagcctctgag
accagccacactcaggagagtgagcttgggcttgtggagagccatctggagtcctccccc
tcagaccagaccctggagacccaggggagctcggaggagaccaaaggaagctttagcagc
gataagagcgggacgggtccagcagagaggcaacagaatccggcttgtatgaagtcagaa
gcccctgatcctgattctgacttgacccctgaccctgaccataacactgacctggatagg
gagagcagcagtgaagagatggagactactgctggggaggatgagggagacgggacaccg
gtgtccttgctggaggtggtgtctgagctggaggccagcagagaggacgagtgtgatgga
gtaactgatggggcttgtgagaggcagtctgacttgttggttcctctggacacagcgtgc
tgtatgtcccaagatggtttcctttacgaggcttctgccccagaggtggtgcctcgtctt
ggccaaagctcccaccaacagccctgtgaacctccggtggtcaaccaggagccccaggcc
ctgctccatctccaggacgactacgcggtgggttctccaggctcagagagccctgcggct
gggctggagctgcccgtggggctccttggggatgcagtgtccagaacctcagtggaggat
ggatctgactgtaccatgagtgcttctatggggtctgatcggggtgcctcccctctgggc
tatgggggggttgtgaccctgcgtcagaggaagaaggcgggacagggagccttgaggttc
gtgcgacagtaccccttcgccttgcaagctctgtggtgtctgctgagcggcagaaccctg
gtggtgctcggggcggatgagggtatagtccgccgactggttgccgctctggccctcttt
gtgcctaatcctgggaagtgtggagagagggttcaggcctggctgtcctgccccttcacc
cttaccgacctgcagaggtggaaactcgttggattgcaaagagtagcgtcccctgtgggt
tcgagcatgctttactcgctgtccagatacagccgctacatctccatcctggatgccgac
cagaagaccttgcgctgtccgccgtatcgaggtcaactcctcgccaacatagccgaccac
cgcacctacatccgccgtggctccacctacttccttcacttacagagcacactctgtcac
ctggcagccagggccttcctgttcaccttcacccaccacctccacctgccggtcagctcc
acggaggggcccgaggtcgtggagggccgacgcctctgcttcctgcaggagcaactgggg
cttggagaggaggacagccaaatactgctctacctcagccagctcatcactcagcagtac
ctacagccggccagcgggagcagagcagcaccgacctgttttagttttaactacaccacc
agcgttttatacaaaatctga
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